RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 U2AF1L5P0DN76 240 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-205ENST00000404914 U2AF1Q01081 240 aaKnown RBP eCLIP19.55■□□□□ 0.72
ATG4B-205ENST00000404914 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-205ENST00000404914 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
ATG4B-205ENST00000404914 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
ATG4B-205ENST00000404914 KANK1Q14678 1352 aa19.54■□□□□ 0.72
ATG4B-205ENST00000404914 AGLP35573 1532 aa19.54■□□□□ 0.72
ATG4B-205ENST00000404914 MROH2AA6NES4 1674 aa19.54■□□□□ 0.72
ATG4B-205ENST00000404914 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-205ENST00000404914 DDX11L8A8MPP1 907 aa19.53■□□□□ 0.72
ATG4B-205ENST00000404914 PKNOX2Q96KN3 472 aa19.53■□□□□ 0.72
ATG4B-205ENST00000404914 SMC5Q8IY18 1101 aa19.52■□□□□ 0.72
ATG4B-205ENST00000404914 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
ATG4B-205ENST00000404914 LNPKQ9C0E8 428 aa19.52■□□□□ 0.72
ATG4B-205ENST00000404914 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
ATG4B-205ENST00000404914 TMEM132EQ6IEE7 984 aa19.51■□□□□ 0.71
ATG4B-205ENST00000404914 NOB1Q9ULX3 412 aaKnown RBP19.51■□□□□ 0.71
ATG4B-205ENST00000404914 MYOM2P54296 1465 aa19.51■□□□□ 0.71
ATG4B-205ENST00000404914 KIF2CQ99661 725 aa19.51■□□□□ 0.71
ATG4B-205ENST00000404914 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
ATG4B-205ENST00000404914 ABCC3O15438 1527 aa19.5■□□□□ 0.71
ATG4B-205ENST00000404914 RBM25P49756 843 aaKnown RBP19.5■□□□□ 0.71
ATG4B-205ENST00000404914 IFT172Q9UG01 1749 aa19.49■□□□□ 0.71
ATG4B-205ENST00000404914 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
ATG4B-205ENST00000404914 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
ATG4B-205ENST00000404914 SBNO2Q9Y2G9 1366 aa19.48■□□□□ 0.71
ATG4B-205ENST00000404914 NOS1P29475 1434 aa19.48■□□□□ 0.71
ATG4B-205ENST00000404914 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
ATG4B-205ENST00000404914 ADGRB2O60241 1585 aa19.48■□□□□ 0.71
ATG4B-205ENST00000404914 RRP9O43818 475 aaKnown RBP19.47■□□□□ 0.71
ATG4B-205ENST00000404914 ZBTB40Q9NUA8 1239 aa19.47■□□□□ 0.71
ATG4B-205ENST00000404914 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
ATG4B-205ENST00000404914 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
ATG4B-205ENST00000404914 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
ATG4B-205ENST00000404914 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
ATG4B-205ENST00000404914 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 KIF1BO60333 1816 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 HSP90AB1P08238 724 aaKnown RBP19.46■□□□□ 0.71
ATG4B-205ENST00000404914 SNX21Q969T3 373 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 CAMSAP1Q5T5Y3 1602 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
ATG4B-205ENST00000404914 AK9Q5TCS8 1911 aa19.46■□□□□ 0.71
ATG4B-205ENST00000404914 NUCB1Q02818 461 aa19.45■□□□□ 0.7
ATG4B-205ENST00000404914 NPATQ14207 1427 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
ATG4B-205ENST00000404914 TRIM44Q96DX7 344 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-205ENST00000404914 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 SSFA2P28290 1259 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
ATG4B-205ENST00000404914 GLIPR1L2Q4G1C9 344 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 PLEKHF1Q96S99 279 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 NRXN1Q9ULB1 1477 aa19.44■□□□□ 0.7
ATG4B-205ENST00000404914 CHD1LQ86WJ1 897 aa19.42■□□□□ 0.7
ATG4B-205ENST00000404914 GAS2L2Q8NHY3 880 aa19.42■□□□□ 0.7
ATG4B-205ENST00000404914 C1orf115Q9H7X2 142 aa19.42■□□□□ 0.7
ATG4B-205ENST00000404914 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
ATG4B-205ENST00000404914 ISY1Q9ULR0 285 aaKnown RBP19.4■□□□□ 0.7
ATG4B-205ENST00000404914 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
ATG4B-205ENST00000404914 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-205ENST00000404914 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-205ENST00000404914 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
ATG4B-205ENST00000404914 NUTM2DQ5VT03 806 aaPredicted RBP19.39■□□□□ 0.7
ATG4B-205ENST00000404914 CIZ1Q9ULV3 898 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-205ENST00000404914 CABP2Q9NPB3 220 aa19.38■□□□□ 0.69
ATG4B-205ENST00000404914 ADGRB1O14514 1584 aa19.38■□□□□ 0.69
ATG4B-205ENST00000404914 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-205ENST00000404914 SAFB2Q14151 953 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATG4B-205ENST00000404914 TBC1D9Q6ZT07 1266 aa19.38■□□□□ 0.69
ATG4B-205ENST00000404914 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
ATG4B-205ENST00000404914 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
ATG4B-205ENST00000404914 FER1L4A9Z1Z3 1794 aa19.37■□□□□ 0.69
ATG4B-205ENST00000404914 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
ATG4B-205ENST00000404914 C14orf93Q9H972 538 aaKnown RBP19.37■□□□□ 0.69
ATG4B-205ENST00000404914 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
ATG4B-205ENST00000404914 K7ELQ4 463 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-205ENST00000404914 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
ATG4B-205ENST00000404914 BMP2KLQ5H9B9 411 aa19.36■□□□□ 0.69
ATG4B-205ENST00000404914 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
ATG4B-205ENST00000404914 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
ATG4B-205ENST00000404914 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
ATG4B-205ENST00000404914 NASPP49321 788 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-205ENST00000404914 RIPK4P57078 832 aa19.35■□□□□ 0.69
ATG4B-205ENST00000404914 NCBP3Q53F19 620 aaKnown RBP19.34■□□□□ 0.69
ATG4B-205ENST00000404914 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-205ENST00000404914 SKOR2Q2VWA4 1001 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-205ENST00000404914 PPP1R9BQ96SB3 815 aa19.34■□□□□ 0.69
ATG4B-205ENST00000404914 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.69
ATG4B-205ENST00000404914 ADGRB3O60242 1522 aa19.33■□□□□ 0.69
ATG4B-205ENST00000404914 ANKRD36BQ8N2N9 1353 aa19.33■□□□□ 0.69
ATG4B-205ENST00000404914 ABCC11Q96J66 1382 aa19.33■□□□□ 0.68
ATG4B-205ENST00000404914 BAG4O95429 457 aaKnown RBP19.33■□□□□ 0.68
ATG4B-205ENST00000404914 SIRT2Q8IXJ6 389 aa19.33■□□□□ 0.68
ATG4B-205ENST00000404914 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.68
ATG4B-205ENST00000404914 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
ATG4B-205ENST00000404914 PKP1Q13835 747 aa19.32■□□□□ 0.68
ATG4B-205ENST00000404914 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
ATG4B-205ENST00000404914 DDX49Q9Y6V7 483 aaKnown RBP19.32■□□□□ 0.68
ATG4B-205ENST00000404914 PPLO60437 1756 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms