RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMC1B-202ENST00000404354 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.5
SMC1B-202ENST00000404354 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.51
SMC1B-202ENST00000404354 AK9Q5TCS8 1911 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
SMC1B-202ENST00000404354 PTPRTO14522 1441 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 NOS1P29475 1434 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
SMC1B-202ENST00000404354 BAG4O95429 457 aaKnown RBP11.89□□□□□ -0.51
SMC1B-202ENST00000404354 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
SMC1B-202ENST00000404354 SCAPERQ9BY12 1400 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 DUOX2Q9NRD8 1548 aa11.89□□□□□ -0.51
SMC1B-202ENST00000404354 AAMPQ13685 434 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 MYOM1P52179 1685 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 UNC13BO14795 1591 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 KANK1Q14678 1352 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
SMC1B-202ENST00000404354 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
SMC1B-202ENST00000404354 DDIT3P35638 169 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
SMC1B-202ENST00000404354 ZGPATQ8N5A5 531 aaKnown RBP11.88□□□□□ -0.51
SMC1B-202ENST00000404354 OTUD7AQ8TE49 926 aaPredicted RBP11.88□□□□□ -0.51
SMC1B-202ENST00000404354 LAMC1P11047 1609 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 IQGAP3Q86VI3 1631 aa11.88□□□□□ -0.51
SMC1B-202ENST00000404354 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
SMC1B-202ENST00000404354 KDM5AP29375 1690 aaKnown RBP11.87□□□□□ -0.51
SMC1B-202ENST00000404354 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
SMC1B-202ENST00000404354 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
SMC1B-202ENST00000404354 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 IQGAP1P46940 1657 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
SMC1B-202ENST00000404354 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 SNX21Q969T3 373 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
SMC1B-202ENST00000404354 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
SMC1B-202ENST00000404354 RNF17Q9BXT8 1623 aaKnown RBP11.86□□□□□ -0.51
SMC1B-202ENST00000404354 DTNBO60941 627 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
SMC1B-202ENST00000404354 PHACTR3Q96KR7 559 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 SHROOM2Q13796 1616 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 PLEKHF1Q96S99 279 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
SMC1B-202ENST00000404354 DIAPH1O60610 1272 aaKnown RBP11.84□□□□□ -0.51
SMC1B-202ENST00000404354 PRDM10Q9NQV6 1147 aa11.84□□□□□ -0.51
SMC1B-202ENST00000404354 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
SMC1B-202ENST00000404354 NSFL1CQ9UNZ2 370 aaKnown RBP11.84□□□□□ -0.51
SMC1B-202ENST00000404354 SYCE3A1L190 88 aa11.84□□□□□ -0.51
SMC1B-202ENST00000404354 FAM83GA6ND36 823 aa11.84□□□□□ -0.51
SMC1B-202ENST00000404354 ZSCAN23Q3MJ62 389 aa11.84□□□□□ -0.51
SMC1B-202ENST00000404354 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 GSPT1P15170 499 aaKnown RBP11.83□□□□□ -0.52
SMC1B-202ENST00000404354 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 TSC1Q92574 1164 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
SMC1B-202ENST00000404354 ZNF518AQ6AHZ1 1483 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 CEP152O94986 1710 aa11.83□□□□□ -0.52
SMC1B-202ENST00000404354 FYB1O15117 783 aa11.82□□□□□ -0.52
SMC1B-202ENST00000404354 KLHL40Q2TBA0 621 aa11.82□□□□□ -0.52
SMC1B-202ENST00000404354 GDPD2Q9HCC8 539 aa11.82□□□□□ -0.52
SMC1B-202ENST00000404354 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
SMC1B-202ENST00000404354 IQSEC2Q5JU85 1478 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 FAM177BA6PVY3 158 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 CDC45O75419 566 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 C14orf93Q9H972 538 aaKnown RBP11.81□□□□□ -0.52
SMC1B-202ENST00000404354 PLCH2O75038 1416 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 TPM2P07951 284 aa11.81□□□□□ -0.52
SMC1B-202ENST00000404354 PTMAP06454 111 aaKnown RBP11.81□□□□□ -0.52
SMC1B-202ENST00000404354 UQCRHLA0A096LP55 91 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 UQCRHP07919 91 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
SMC1B-202ENST00000404354 ZNF830Q96NB3 372 aaPredicted RBP11.8□□□□□ -0.52
SMC1B-202ENST00000404354 PDCL3Q9H2J4 239 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 LMBRD1Q9NUN5 540 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 OFD1O75665 1012 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 PLCB2Q00722 1185 aa11.8□□□□□ -0.52
SMC1B-202ENST00000404354 PLXNC1O60486 1568 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 SOX12O15370 315 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 VAMP4O75379 141 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 GPT2Q8TD30 523 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
SMC1B-202ENST00000404354 PLEKHM2Q8IWE5 1019 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 TRPM2O94759 1503 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 NCOA3Q9Y6Q9 1424 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 SHPRHQ149N8 1683 aa11.79□□□□□ -0.52
SMC1B-202ENST00000404354 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
SMC1B-202ENST00000404354 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms