RNA–Protein interactions for RNA: ENST00000404167.1

COX6A1P3-201, Transcript of cytochrome c oxidase subunit 6A1 pseudogene 3, humanhuman

BASIC

Gene COX6A1P3, Length 293 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P3-201ENST00000404167 PNPLA6Q8IY17 1366 aa10.58□□□□□ -0.72
COX6A1P3-201ENST00000404167 MTHFSP49914 203 aa10.57□□□□□ -0.72
COX6A1P3-201ENST00000404167 GGNBP2Q9H3C7 697 aa10.57□□□□□ -0.72
COX6A1P3-201ENST00000404167 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
COX6A1P3-201ENST00000404167 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
COX6A1P3-201ENST00000404167 SUPT16HQ9Y5B9 1047 aaKnown RBP10.56□□□□□ -0.72
COX6A1P3-201ENST00000404167 KIF1AQ12756 1690 aa10.56□□□□□ -0.72
COX6A1P3-201ENST00000404167 TTC21AQ8NDW8 1320 aa10.56□□□□□ -0.72
COX6A1P3-201ENST00000404167 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
COX6A1P3-201ENST00000404167 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
COX6A1P3-201ENST00000404167 ACEP12821 1306 aa10.55□□□□□ -0.72
COX6A1P3-201ENST00000404167 ZNF521Q96K83 1311 aa10.55□□□□□ -0.72
COX6A1P3-201ENST00000404167 LMTK3Q96Q04 1460 aa10.55□□□□□ -0.72
COX6A1P3-201ENST00000404167 DCCP43146 1447 aa10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 NCOA3Q9Y6Q9 1424 aa10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 RNF123Q5XPI4 1314 aa10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
COX6A1P3-201ENST00000404167 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
COX6A1P3-201ENST00000404167 COG3Q96JB2 828 aa10.53□□□□□ -0.72
COX6A1P3-201ENST00000404167 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
COX6A1P3-201ENST00000404167 NME9Q86XW9 330 aa10.52□□□□□ -0.73
COX6A1P3-201ENST00000404167 RUNDC1Q96C34 613 aa10.52□□□□□ -0.73
COX6A1P3-201ENST00000404167 STRCP1A6NGW2 1772 aa10.52□□□□□ -0.73
COX6A1P3-201ENST00000404167 FKBP8Q14318 412 aa10.51□□□□□ -0.73
COX6A1P3-201ENST00000404167 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
COX6A1P3-201ENST00000404167 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
COX6A1P3-201ENST00000404167 POLKQ9UBT6 870 aa10.5□□□□□ -0.73
COX6A1P3-201ENST00000404167 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
COX6A1P3-201ENST00000404167 PHRF1Q9P1Y6 1649 aaKnown RBP10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 APAF1O14727 1248 aa10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 DIAPH1O60610 1272 aaKnown RBP10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 CCDC27Q2M243 656 aa10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 CCDC146Q8IYE0 955 aa10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 PNNQ9H307 717 aaKnown RBP10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
COX6A1P3-201ENST00000404167 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
COX6A1P3-201ENST00000404167 U2AF1L5P0DN76 240 aaPredicted RBP10.48□□□□□ -0.73
COX6A1P3-201ENST00000404167 U2AF1Q01081 240 aaKnown RBP eCLIP10.48□□□□□ -0.73
COX6A1P3-201ENST00000404167 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
COX6A1P3-201ENST00000404167 KDM4FA0A1W2PPD8 638 aa10.47□□□□□ -0.73
COX6A1P3-201ENST00000404167 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
COX6A1P3-201ENST00000404167 E9PSI1 815 aa10.47□□□□□ -0.73
COX6A1P3-201ENST00000404167 SLFN5Q08AF3 891 aa10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 DUSP27Q5VZP5 1158 aa10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
COX6A1P3-201ENST00000404167 SBNO1A3KN83 1393 aa10.46□□□□□ -0.74
COX6A1P3-201ENST00000404167 RTL1A6NKG5 1358 aa10.46□□□□□ -0.74
COX6A1P3-201ENST00000404167 MST1RQ04912 1400 aa10.46□□□□□ -0.74
COX6A1P3-201ENST00000404167 XIRP1Q702N8 1843 aaKnown RBP10.46□□□□□ -0.74
COX6A1P3-201ENST00000404167 SLIT3O75094 1523 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 NFAT5O94916 1531 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 FLT4P35916 1363 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 MAPK8IP3Q9UPT6 1336 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 FCHSD2O94868 740 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 PLEKHF1Q96S99 279 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
COX6A1P3-201ENST00000404167 LTN1O94822 1766 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 IL13P35225 146 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 C14orf37Q86TY3 774 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 PROSER2Q86WR7 435 aaPredicted RBP10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
COX6A1P3-201ENST00000404167 ARHGEF10O15013 1369 aa10.43□□□□□ -0.74
COX6A1P3-201ENST00000404167 RSPH6AQ9H0K4 717 aa10.43□□□□□ -0.74
COX6A1P3-201ENST00000404167 IL16Q14005 1332 aa10.42□□□□□ -0.74
COX6A1P3-201ENST00000404167 NEFMP07197 916 aa10.42□□□□□ -0.74
COX6A1P3-201ENST00000404167 RRS1Q15050 365 aaKnown RBP10.42□□□□□ -0.74
COX6A1P3-201ENST00000404167 MED1Q15648 1581 aaPredicted RBP10.41□□□□□ -0.74
COX6A1P3-201ENST00000404167 PPM1GO15355 546 aaPredicted RBP10.41□□□□□ -0.74
COX6A1P3-201ENST00000404167 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
COX6A1P3-201ENST00000404167 HSPA2P54652 639 aa10.41□□□□□ -0.74
COX6A1P3-201ENST00000404167 DLG5Q8TDM6 1919 aa10.41□□□□□ -0.74
COX6A1P3-201ENST00000404167 MSH6P52701 1360 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 ABCC6O95255 1503 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 MYH16Q9H6N6 1097 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
COX6A1P3-201ENST00000404167 KDRP35968 1356 aa10.39□□□□□ -0.75
COX6A1P3-201ENST00000404167 CAMTA1Q9Y6Y1 1673 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms