RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
NLRC4-204ENST00000404025 PLPPR3Q6T4P5 718 aa9.66□□□□□ -0.86
NLRC4-204ENST00000404025 ARHGEF28Q8N1W1 1705 aaKnown RBP9.66□□□□□ -0.86
NLRC4-204ENST00000404025 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
NLRC4-204ENST00000404025 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
NLRC4-204ENST00000404025 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
NLRC4-204ENST00000404025 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
NLRC4-204ENST00000404025 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
NLRC4-204ENST00000404025 PLEKHF1Q96S99 279 aa9.65□□□□□ -0.86
NLRC4-204ENST00000404025 SHPRHQ149N8 1683 aa9.65□□□□□ -0.86
NLRC4-204ENST00000404025 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
NLRC4-204ENST00000404025 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.86
NLRC4-204ENST00000404025 RICTORQ6R327 1708 aa9.65□□□□□ -0.87
NLRC4-204ENST00000404025 PTPRMP28827 1452 aa9.64□□□□□ -0.87
NLRC4-204ENST00000404025 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
NLRC4-204ENST00000404025 NOB1Q9ULX3 412 aaKnown RBP9.64□□□□□ -0.87
NLRC4-204ENST00000404025 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
NLRC4-204ENST00000404025 RIMS2Q9UQ26 1411 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 ELL2O00472 640 aaPredicted RBP9.63□□□□□ -0.87
NLRC4-204ENST00000404025 SEC24BO95487 1268 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 TRIM27P14373 513 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 AAMPQ13685 434 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 NME9Q86XW9 330 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 NCKAP5LQ9HCH0 1330 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 THUMPD2Q9BTF0 503 aaKnown RBP9.63□□□□□ -0.87
NLRC4-204ENST00000404025 TSPOAP1O95153 1857 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 FCHSD2O94868 740 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
NLRC4-204ENST00000404025 MYO5BQ9ULV0 1848 aa9.63□□□□□ -0.87
NLRC4-204ENST00000404025 PREX1Q8TCU6 1659 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 TMEM131LA2VDJ0 1609 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 USP32Q8NFA0 1604 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
NLRC4-204ENST00000404025 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 PPP6R1Q9UPN7 881 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
NLRC4-204ENST00000404025 NFKBIBQ15653 356 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 NCBP3Q53F19 620 aaKnown RBP9.62□□□□□ -0.87
NLRC4-204ENST00000404025 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.62□□□□□ -0.87
NLRC4-204ENST00000404025 DDX19BQ9UMR2 479 aa9.62□□□□□ -0.87
NLRC4-204ENST00000404025 HDGFP51858 240 aaKnown RBP9.61□□□□□ -0.87
NLRC4-204ENST00000404025 RRS1Q15050 365 aaKnown RBP9.61□□□□□ -0.87
NLRC4-204ENST00000404025 TMEM57Q8N5G2 664 aa9.61□□□□□ -0.87
NLRC4-204ENST00000404025 NUDT16Q96DE0 195 aaKnown RBP9.61□□□□□ -0.87
NLRC4-204ENST00000404025 COG3Q96JB2 828 aa9.61□□□□□ -0.87
NLRC4-204ENST00000404025 SOX12O15370 315 aa9.61□□□□□ -0.87
NLRC4-204ENST00000404025 PHACTR3Q96KR7 559 aa9.61□□□□□ -0.87
NLRC4-204ENST00000404025 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
NLRC4-204ENST00000404025 BECN1Q14457 450 aa9.6□□□□□ -0.87
NLRC4-204ENST00000404025 IL16Q14005 1332 aa9.6□□□□□ -0.87
NLRC4-204ENST00000404025 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 ARHGEF40Q8TER5 1519 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 SLKQ9H2G2 1235 aaPredicted RBP9.59□□□□□ -0.87
NLRC4-204ENST00000404025 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 KIF16BQ96L93 1317 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
NLRC4-204ENST00000404025 METP08581 1390 aa9.58□□□□□ -0.88
NLRC4-204ENST00000404025 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
NLRC4-204ENST00000404025 MFAP1P55081 439 aaKnown RBP9.57□□□□□ -0.88
NLRC4-204ENST00000404025 CALD1Q05682 793 aaKnown RBP9.57□□□□□ -0.88
NLRC4-204ENST00000404025 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
NLRC4-204ENST00000404025 NLRP1Q9C000 1473 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 USP19O94966 1318 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 GNAI1P63096 354 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 DCTN1Q14203 1278 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
NLRC4-204ENST00000404025 FRAT2O75474 233 aaPredicted RBP9.56□□□□□ -0.88
NLRC4-204ENST00000404025 TSPYL6Q8N831 410 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 CLTCQ00610 1675 aaKnown RBP9.56□□□□□ -0.88
NLRC4-204ENST00000404025 MED14O60244 1454 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 FAM83GA6ND36 823 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 IL13P35225 146 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 LNPKQ9C0E8 428 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
NLRC4-204ENST00000404025 ALDH1L2Q3SY69 923 aa9.55□□□□□ -0.88
NLRC4-204ENST00000404025 SLC26A8Q96RN1 970 aa9.55□□□□□ -0.88
NLRC4-204ENST00000404025 ADGRB2O60241 1585 aa9.55□□□□□ -0.88
NLRC4-204ENST00000404025 DIP2BQ9P265 1576 aa9.55□□□□□ -0.88
NLRC4-204ENST00000404025 CEBPAP49715 358 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-204ENST00000404025 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-204ENST00000404025 TWISTNBQ3B726 338 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-204ENST00000404025 MBIPQ9NS73 344 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 ZBTB40Q9NUA8 1239 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 EDC4Q6P2E9 1401 aaKnown RBP9.54□□□□□ -0.88
NLRC4-204ENST00000404025 VAMP4O75379 141 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
NLRC4-204ENST00000404025 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
NLRC4-204ENST00000404025 ATP7BP35670 1465 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms