RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 LMTK3Q96Q04 1460 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 KIF20BQ96Q89 1820 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 FBLN1P23142 703 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
CEACAM1-206ENST00000403136 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.41
CEACAM1-206ENST00000403136 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
CEACAM1-206ENST00000403136 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 SMG6Q86US8 1419 aaKnown RBP17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
CEACAM1-206ENST00000403136 NALCNQ8IZF0 1738 aa17.62■□□□□ 0.41
CEACAM1-206ENST00000403136 APAF1O14727 1248 aa17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 SUPT16HQ9Y5B9 1047 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 PPM1GO15355 546 aaPredicted RBP17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
CEACAM1-206ENST00000403136 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
CEACAM1-206ENST00000403136 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
CEACAM1-206ENST00000403136 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
CEACAM1-206ENST00000403136 EMILIN1Q9Y6C2 1016 aa17.59■□□□□ 0.41
CEACAM1-206ENST00000403136 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.41
CEACAM1-206ENST00000403136 SHPRHQ149N8 1683 aa17.58■□□□□ 0.41
CEACAM1-206ENST00000403136 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 TMEM94Q12767 1356 aa17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
CEACAM1-206ENST00000403136 USP31Q70CQ4 1352 aa17.57■□□□□ 0.4
CEACAM1-206ENST00000403136 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
CEACAM1-206ENST00000403136 CDCA7LQ96GN5 454 aa17.57■□□□□ 0.4
CEACAM1-206ENST00000403136 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
CEACAM1-206ENST00000403136 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
CEACAM1-206ENST00000403136 NEFLP07196 543 aa17.56■□□□□ 0.4
CEACAM1-206ENST00000403136 PSME1Q06323 249 aa17.56■□□□□ 0.4
CEACAM1-206ENST00000403136 NLRP6P59044 892 aa17.55■□□□□ 0.4
CEACAM1-206ENST00000403136 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
CEACAM1-206ENST00000403136 ATF3P18847 181 aa17.54■□□□□ 0.4
CEACAM1-206ENST00000403136 FKBP8Q14318 412 aa17.54■□□□□ 0.4
CEACAM1-206ENST00000403136 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
CEACAM1-206ENST00000403136 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 MAP2P11137 1827 aaKnown RBP17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 IL13P35225 146 aa17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
CEACAM1-206ENST00000403136 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
CEACAM1-206ENST00000403136 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
CEACAM1-206ENST00000403136 FOXO3O43524 673 aa17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 FCHSD2O94868 740 aa17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 C1orf167Q5SNV9 1468 aa17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 CADPS2Q86UW7 1296 aa17.51■□□□□ 0.39
CEACAM1-206ENST00000403136 SOX12O15370 315 aa17.5■□□□□ 0.39
CEACAM1-206ENST00000403136 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
CEACAM1-206ENST00000403136 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
CEACAM1-206ENST00000403136 DCCP43146 1447 aa17.49■□□□□ 0.39
CEACAM1-206ENST00000403136 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
CEACAM1-206ENST00000403136 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
CEACAM1-206ENST00000403136 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
CEACAM1-206ENST00000403136 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
CEACAM1-206ENST00000403136 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
CEACAM1-206ENST00000403136 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
CEACAM1-206ENST00000403136 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 MSH6P52701 1360 aa17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
CEACAM1-206ENST00000403136 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
CEACAM1-206ENST00000403136 MST1RQ04912 1400 aa17.46■□□□□ 0.39
CEACAM1-206ENST00000403136 HSP90AB2PQ58FF8 381 aa17.46■□□□□ 0.39
CEACAM1-206ENST00000403136 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.39
CEACAM1-206ENST00000403136 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
CEACAM1-206ENST00000403136 E9PSI1 815 aa17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 HMOX1P09601 288 aa17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
CEACAM1-206ENST00000403136 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
CEACAM1-206ENST00000403136 AMPHP49418 695 aa17.44■□□□□ 0.38
CEACAM1-206ENST00000403136 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
CEACAM1-206ENST00000403136 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
CEACAM1-206ENST00000403136 NEFMP07197 916 aa17.43■□□□□ 0.38
CEACAM1-206ENST00000403136 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
CEACAM1-206ENST00000403136 FLT4P35916 1363 aa17.42■□□□□ 0.38
CEACAM1-206ENST00000403136 KCNH5Q8NCM2 988 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms