RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
PRAME-203ENST00000402697 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
PRAME-203ENST00000402697 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
PRAME-203ENST00000402697 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
PRAME-203ENST00000402697 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
PRAME-203ENST00000402697 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
PRAME-203ENST00000402697 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
PRAME-203ENST00000402697 ATP7BP35670 1465 aa16.78■□□□□ 0.28
PRAME-203ENST00000402697 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.28
PRAME-203ENST00000402697 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
PRAME-203ENST00000402697 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.28
PRAME-203ENST00000402697 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.282e-24■□□□□ 8.6
PRAME-203ENST00000402697 ADAMTSL3P82987 1691 aa16.77■□□□□ 0.28
PRAME-203ENST00000402697 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.27
PRAME-203ENST00000402697 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.27
PRAME-203ENST00000402697 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.27
PRAME-203ENST00000402697 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.27
PRAME-203ENST00000402697 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
PRAME-203ENST00000402697 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
PRAME-203ENST00000402697 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
PRAME-203ENST00000402697 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
PRAME-203ENST00000402697 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
PRAME-203ENST00000402697 FYB1O15117 783 aa16.74■□□□□ 0.27
PRAME-203ENST00000402697 LTKP29376 864 aa16.74■□□□□ 0.27
PRAME-203ENST00000402697 SIRT1Q96EB6 747 aa16.74■□□□□ 0.27
PRAME-203ENST00000402697 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
PRAME-203ENST00000402697 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
PRAME-203ENST00000402697 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
PRAME-203ENST00000402697 PLEKHF1Q96S99 279 aa16.73■□□□□ 0.27
PRAME-203ENST00000402697 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
PRAME-203ENST00000402697 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
PRAME-203ENST00000402697 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
PRAME-203ENST00000402697 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
PRAME-203ENST00000402697 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
PRAME-203ENST00000402697 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
PRAME-203ENST00000402697 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
PRAME-203ENST00000402697 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
PRAME-203ENST00000402697 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
PRAME-203ENST00000402697 DIP2AQ14689 1571 aa16.7■□□□□ 0.26
PRAME-203ENST00000402697 FCHSD2O94868 740 aa16.69■□□□□ 0.26
PRAME-203ENST00000402697 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.69■□□□□ 0.26
PRAME-203ENST00000402697 ZKSCAN2Q63HK3 967 aa16.69■□□□□ 0.26
PRAME-203ENST00000402697 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
PRAME-203ENST00000402697 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
PRAME-203ENST00000402697 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
PRAME-203ENST00000402697 COG6Q9Y2V7 657 aa16.69■□□□□ 0.26
PRAME-203ENST00000402697 ROBO2Q9HCK4 1378 aa16.68■□□□□ 0.26
PRAME-203ENST00000402697 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
PRAME-203ENST00000402697 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
PRAME-203ENST00000402697 PTPRUQ92729 1446 aa16.67■□□□□ 0.26
PRAME-203ENST00000402697 IGHDP01880 384 aa16.67■□□□□ 0.26
PRAME-203ENST00000402697 NEFMP07197 916 aa16.67■□□□□ 0.26
PRAME-203ENST00000402697 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
PRAME-203ENST00000402697 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
PRAME-203ENST00000402697 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
PRAME-203ENST00000402697 CALD1Q05682 793 aaKnown RBP16.66■□□□□ 0.26
PRAME-203ENST00000402697 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
PRAME-203ENST00000402697 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
PRAME-203ENST00000402697 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
PRAME-203ENST00000402697 MVPQ14764 893 aaKnown RBP16.66■□□□□ 0.26
PRAME-203ENST00000402697 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
PRAME-203ENST00000402697 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
PRAME-203ENST00000402697 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
PRAME-203ENST00000402697 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
PRAME-203ENST00000402697 AATKQ6ZMQ8 1374 aa16.65■□□□□ 0.26
PRAME-203ENST00000402697 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
PRAME-203ENST00000402697 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
PRAME-203ENST00000402697 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.26
PRAME-203ENST00000402697 PPIP5K1Q6PFW1 1433 aa16.64■□□□□ 0.25
PRAME-203ENST00000402697 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
PRAME-203ENST00000402697 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
PRAME-203ENST00000402697 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
PRAME-203ENST00000402697 RGS3P49796 1198 aa16.64■□□□□ 0.25
PRAME-203ENST00000402697 NBR1Q14596 966 aa16.64■□□□□ 0.25
PRAME-203ENST00000402697 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
PRAME-203ENST00000402697 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
PRAME-203ENST00000402697 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
PRAME-203ENST00000402697 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
PRAME-203ENST00000402697 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
PRAME-203ENST00000402697 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
PRAME-203ENST00000402697 PTCH1Q13635 1447 aa16.63■□□□□ 0.25
PRAME-203ENST00000402697 FTSJ3Q8IY81 847 aaKnown RBP16.62■□□□□ 0.25
PRAME-203ENST00000402697 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
PRAME-203ENST00000402697 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
PRAME-203ENST00000402697 RIPK4P57078 832 aa16.61■□□□□ 0.25
PRAME-203ENST00000402697 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
PRAME-203ENST00000402697 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
PRAME-203ENST00000402697 TBX22Q9Y458 520 aa16.61■□□□□ 0.25
PRAME-203ENST00000402697 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
PRAME-203ENST00000402697 RLBP1P12271 317 aa16.6■□□□□ 0.25
PRAME-203ENST00000402697 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
PRAME-203ENST00000402697 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
PRAME-203ENST00000402697 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
PRAME-203ENST00000402697 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
PRAME-203ENST00000402697 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
PRAME-203ENST00000402697 POLKQ9UBT6 870 aa16.59■□□□□ 0.25
PRAME-203ENST00000402697 PCDHB15Q9Y5E8 787 aa16.59■□□□□ 0.25
PRAME-203ENST00000402697 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
PRAME-203ENST00000402697 LMOD3Q0VAK6 560 aa16.58■□□□□ 0.25
PRAME-203ENST00000402697 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms