RNA–Protein interactions for RNA: ENST00000402580.7

XRCC6-203, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-203ENST00000402580 C8orf37Q96NL8 207 aa14.37□□□□□ -0.11
XRCC6-203ENST00000402580 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
XRCC6-203ENST00000402580 SLIT2O94813 1529 aa14.36□□□□□ -0.11
XRCC6-203ENST00000402580 ATRNO75882 1429 aa14.36□□□□□ -0.11
XRCC6-203ENST00000402580 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
XRCC6-203ENST00000402580 RXRBP28702 533 aa14.36□□□□□ -0.11
XRCC6-203ENST00000402580 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
XRCC6-203ENST00000402580 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
XRCC6-203ENST00000402580 RBM6P78332 1123 aaKnown RBP14.35□□□□□ -0.11
XRCC6-203ENST00000402580 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
XRCC6-203ENST00000402580 BCL9LQ86UU0 1499 aa14.34□□□□□ -0.11
XRCC6-203ENST00000402580 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
XRCC6-203ENST00000402580 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
XRCC6-203ENST00000402580 TRPC5Q9UL62 973 aaPredicted RBP14.34□□□□□ -0.11
XRCC6-203ENST00000402580 ACEP12821 1306 aa14.33□□□□□ -0.11
XRCC6-203ENST00000402580 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.12
XRCC6-203ENST00000402580 USP21Q9UK80 565 aa14.33□□□□□ -0.12
XRCC6-203ENST00000402580 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.12
XRCC6-203ENST00000402580 PLCH1Q4KWH8 1693 aa14.33□□□□□ -0.12
XRCC6-203ENST00000402580 SRPK2P78362 688 aaKnown RBP14.32□□□□□ -0.12
XRCC6-203ENST00000402580 ATAD2Q6PL18 1390 aa14.32□□□□□ -0.12
XRCC6-203ENST00000402580 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
XRCC6-203ENST00000402580 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
XRCC6-203ENST00000402580 PHRF1Q9P1Y6 1649 aaKnown RBP14.32□□□□□ -0.12
XRCC6-203ENST00000402580 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
XRCC6-203ENST00000402580 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
XRCC6-203ENST00000402580 NRAPQ86VF7 1730 aa14.3□□□□□ -0.12
XRCC6-203ENST00000402580 UNC5CLQ8IV45 518 aa14.29□□□□□ -0.12
XRCC6-203ENST00000402580 USP6P35125 1406 aa14.29□□□□□ -0.12
XRCC6-203ENST00000402580 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
XRCC6-203ENST00000402580 RGS12O14924 1447 aa14.28□□□□□ -0.12
XRCC6-203ENST00000402580 USP19O94966 1318 aa14.27□□□□□ -0.12
XRCC6-203ENST00000402580 HAP1P54257 671 aaPredicted RBP14.27□□□□□ -0.12
XRCC6-203ENST00000402580 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.13
XRCC6-203ENST00000402580 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.13
XRCC6-203ENST00000402580 LMOD2Q6P5Q4 547 aa14.27□□□□□ -0.13
XRCC6-203ENST00000402580 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
XRCC6-203ENST00000402580 CABLES1Q8TDN4 633 aa14.26□□□□□ -0.13
XRCC6-203ENST00000402580 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
XRCC6-203ENST00000402580 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
XRCC6-203ENST00000402580 GLI3P10071 1580 aa14.26□□□□□ -0.13
XRCC6-203ENST00000402580 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
XRCC6-203ENST00000402580 VPS72Q15906 364 aa14.25□□□□□ -0.13
XRCC6-203ENST00000402580 GJD4Q96KN9 370 aaPredicted RBP14.25□□□□□ -0.13
XRCC6-203ENST00000402580 CPDO75976 1380 aa14.25□□□□□ -0.13
XRCC6-203ENST00000402580 NINLQ9Y2I6 1382 aa14.25□□□□□ -0.13
XRCC6-203ENST00000402580 SLIT3O75094 1523 aa14.24□□□□□ -0.13
XRCC6-203ENST00000402580 FAM83GA6ND36 823 aa14.24□□□□□ -0.13
XRCC6-203ENST00000402580 NLRP13Q86W25 1043 aa14.24□□□□□ -0.13
XRCC6-203ENST00000402580 TTC21AQ8NDW8 1320 aa14.24□□□□□ -0.13
XRCC6-203ENST00000402580 ONECUT3O60422 494 aaPredicted RBP14.23□□□□□ -0.13
XRCC6-203ENST00000402580 TESK2Q96S53 571 aa14.23□□□□□ -0.13
XRCC6-203ENST00000402580 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
XRCC6-203ENST00000402580 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
XRCC6-203ENST00000402580 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
XRCC6-203ENST00000402580 CD163L1Q9NR16 1453 aa14.21□□□□□ -0.14
XRCC6-203ENST00000402580 TTC21BQ7Z4L5 1316 aa14.2□□□□□ -0.14
XRCC6-203ENST00000402580 ABCC6O95255 1503 aa14.2□□□□□ -0.14
XRCC6-203ENST00000402580 USP31Q70CQ4 1352 aa14.19□□□□□ -0.14
XRCC6-203ENST00000402580 KIAA0232Q92628 1395 aa14.19□□□□□ -0.14
XRCC6-203ENST00000402580 USP47Q96K76 1375 aa14.19□□□□□ -0.14
XRCC6-203ENST00000402580 ST20-MTHFSA0A0A6YYL1 179 aa14.19□□□□□ -0.14
XRCC6-203ENST00000402580 UPF1Q92900 1129 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRCC6-203ENST00000402580 PRDM11Q9NQV5 511 aa14.19□□□□□ -0.14
XRCC6-203ENST00000402580 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
XRCC6-203ENST00000402580 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
XRCC6-203ENST00000402580 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
XRCC6-203ENST00000402580 EDC4Q6P2E9 1401 aaKnown RBP14.17□□□□□ -0.14
XRCC6-203ENST00000402580 GCP02774 474 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 COL18A1P39060 1754 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
XRCC6-203ENST00000402580 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 SPATA31A5Q5VU36 1347 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 SPATA31A7Q8IWB4 1347 aa14.17□□□□□ -0.14
XRCC6-203ENST00000402580 BRWD3Q6RI45 1802 aa14.16□□□□□ -0.14
XRCC6-203ENST00000402580 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
XRCC6-203ENST00000402580 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
XRCC6-203ENST00000402580 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
XRCC6-203ENST00000402580 NLRP6P59044 892 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 TMF1P82094 1093 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 CCDC125Q86Z20 511 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 CAMTA1Q9Y6Y1 1673 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
XRCC6-203ENST00000402580 NFAT5O94916 1531 aa14.14□□□□□ -0.15
XRCC6-203ENST00000402580 NUTM2GQ5VZR2 741 aa14.14□□□□□ -0.15
XRCC6-203ENST00000402580 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
XRCC6-203ENST00000402580 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
XRCC6-203ENST00000402580 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
XRCC6-203ENST00000402580 A0A1W2PP64 1363 aa14.12□□□□□ -0.15
XRCC6-203ENST00000402580 SEPT12Q8IYM1 358 aa14.12□□□□□ -0.15
XRCC6-203ENST00000402580 COL5A2P05997 1499 aaPredicted RBP14.12□□□□□ -0.15
XRCC6-203ENST00000402580 ANKRD36BQ8N2N9 1353 aa14.12□□□□□ -0.15
XRCC6-203ENST00000402580 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
XRCC6-203ENST00000402580 BARGINQ6ZT62 677 aa14.12□□□□□ -0.15
XRCC6-203ENST00000402580 THRAP3Q9Y2W1 955 aaKnown RBP14.12□□□□□ -0.15
XRCC6-203ENST00000402580 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
XRCC6-203ENST00000402580 CCDC9Q9Y3X0 531 aaKnown RBP14.11□□□□□ -0.15
XRCC6-203ENST00000402580 ANP32CO43423 234 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms