RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
PRAMEF1-202ENST00000400814 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
PRAMEF1-202ENST00000400814 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
PRAMEF1-202ENST00000400814 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
PRAMEF1-202ENST00000400814 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
PRAMEF1-202ENST00000400814 NPATQ14207 1427 aa13.75□□□□□ -0.21
PRAMEF1-202ENST00000400814 TRPM2O94759 1503 aa13.74□□□□□ -0.21
PRAMEF1-202ENST00000400814 ARID3AQ99856 593 aa13.74□□□□□ -0.21
PRAMEF1-202ENST00000400814 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
PRAMEF1-202ENST00000400814 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
PRAMEF1-202ENST00000400814 NPDC1Q9NQX5 325 aaPredicted RBP13.73□□□□□ -0.21
PRAMEF1-202ENST00000400814 SEC24BO95487 1268 aa13.72□□□□□ -0.21
PRAMEF1-202ENST00000400814 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
PRAMEF1-202ENST00000400814 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
PRAMEF1-202ENST00000400814 NOS1P29475 1434 aa13.72□□□□□ -0.21
PRAMEF1-202ENST00000400814 EPAS1Q99814 870 aa13.71□□□□□ -0.21
PRAMEF1-202ENST00000400814 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
PRAMEF1-202ENST00000400814 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
PRAMEF1-202ENST00000400814 ARID4BQ4LE39 1312 aaPredicted RBP13.7□□□□□ -0.22
PRAMEF1-202ENST00000400814 PHF14O94880 888 aa13.7□□□□□ -0.22
PRAMEF1-202ENST00000400814 EN1Q05925 392 aaPredicted RBP13.7□□□□□ -0.22
PRAMEF1-202ENST00000400814 MLECQ14165 292 aa13.7□□□□□ -0.22
PRAMEF1-202ENST00000400814 APBB1O00213 710 aa13.69□□□□□ -0.22
PRAMEF1-202ENST00000400814 CLCN1P35523 988 aa13.69□□□□□ -0.22
PRAMEF1-202ENST00000400814 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
PRAMEF1-202ENST00000400814 NEURL4Q96JN8 1562 aa13.69□□□□□ -0.22
PRAMEF1-202ENST00000400814 SLC34A2O95436 690 aa13.68□□□□□ -0.22
PRAMEF1-202ENST00000400814 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
PRAMEF1-202ENST00000400814 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
PRAMEF1-202ENST00000400814 CFAP65Q6ZU64 1925 aaKnown RBP13.68□□□□□ -0.22
PRAMEF1-202ENST00000400814 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
PRAMEF1-202ENST00000400814 MAP3K7O43318 606 aa13.66□□□□□ -0.22
PRAMEF1-202ENST00000400814 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
PRAMEF1-202ENST00000400814 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
PRAMEF1-202ENST00000400814 ZMYM3Q14202 1370 aa13.66□□□□□ -0.22
PRAMEF1-202ENST00000400814 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
PRAMEF1-202ENST00000400814 A6NJR5 290 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
PRAMEF1-202ENST00000400814 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 SYNMO15061 1565 aa13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 PHOX2BQ99453 314 aa13.64□□□□□ -0.23
PRAMEF1-202ENST00000400814 ERVK-7P63135 1459 aa13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 KIF1BO60333 1816 aa13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 SSTR3P32745 418 aaPredicted RBP13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 IDI1Q13907 227 aa13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 CLUAP1Q96AJ1 413 aa13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
PRAMEF1-202ENST00000400814 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
PRAMEF1-202ENST00000400814 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
PRAMEF1-202ENST00000400814 SKIV2LQ15477 1246 aaKnown RBP13.62□□□□□ -0.23
PRAMEF1-202ENST00000400814 PCDHGA10Q9Y5H3 936 aa13.62□□□□□ -0.23
PRAMEF1-202ENST00000400814 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
PRAMEF1-202ENST00000400814 SLAIN1Q8ND83 568 aa13.61□□□□□ -0.23
PRAMEF1-202ENST00000400814 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
PRAMEF1-202ENST00000400814 TRAK2O60296 914 aa13.6□□□□□ -0.23
PRAMEF1-202ENST00000400814 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
PRAMEF1-202ENST00000400814 C3orf67Q6ZVT6 689 aa13.6□□□□□ -0.23
PRAMEF1-202ENST00000400814 ADGRB3O60242 1522 aa13.6□□□□□ -0.23
PRAMEF1-202ENST00000400814 RPGRIP1LQ68CZ1 1315 aa13.59□□□□□ -0.23
PRAMEF1-202ENST00000400814 SLC39A7Q92504 469 aa13.59□□□□□ -0.23
PRAMEF1-202ENST00000400814 GABBR2O75899 941 aa13.58□□□□□ -0.24
PRAMEF1-202ENST00000400814 MCM6Q14566 821 aa13.58□□□□□ -0.24
PRAMEF1-202ENST00000400814 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
PRAMEF1-202ENST00000400814 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
PRAMEF1-202ENST00000400814 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
PRAMEF1-202ENST00000400814 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
PRAMEF1-202ENST00000400814 ADAMTSL3P82987 1691 aa13.56□□□□□ -0.24
PRAMEF1-202ENST00000400814 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
PRAMEF1-202ENST00000400814 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 TNRQ92752 1358 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 C3P01024 1663 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 MYOM2P54296 1465 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 OATP04181 439 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 C7P10643 843 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 CEBPAP49715 358 aaPredicted RBP13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
PRAMEF1-202ENST00000400814 METTL3Q86U44 580 aaKnown RBP13.53□□□□□ -0.24
PRAMEF1-202ENST00000400814 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.24
PRAMEF1-202ENST00000400814 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.24
PRAMEF1-202ENST00000400814 PPLO60437 1756 aa13.52□□□□□ -0.25
PRAMEF1-202ENST00000400814 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
PRAMEF1-202ENST00000400814 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
PRAMEF1-202ENST00000400814 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
PRAMEF1-202ENST00000400814 MADDQ8WXG6 1647 aa13.51□□□□□ -0.25
PRAMEF1-202ENST00000400814 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms