RNA–Protein interactions for RNA: ENST00000400470.3

RAB6A-203, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-203ENST00000400470 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
RAB6A-203ENST00000400470 MAP10Q9P2G4 905 aa8.06□□□□□ -1.12
RAB6A-203ENST00000400470 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
RAB6A-203ENST00000400470 ALDH1A1P00352 501 aa8.05□□□□□ -1.12
RAB6A-203ENST00000400470 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
RAB6A-203ENST00000400470 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
RAB6A-203ENST00000400470 GPBP1L1Q9HC44 474 aaPredicted RBP8.05□□□□□ -1.12
RAB6A-203ENST00000400470 CTHP32929 405 aa8.04□□□□□ -1.12
RAB6A-203ENST00000400470 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
RAB6A-203ENST00000400470 NUTM2BA6NNL0 878 aaPredicted RBP8.03□□□□□ -1.12
RAB6A-203ENST00000400470 NUTM2EB1AL46 878 aaPredicted RBP8.03□□□□□ -1.12
RAB6A-203ENST00000400470 NUTM2DQ5VT03 806 aaPredicted RBP8.03□□□□□ -1.12
RAB6A-203ENST00000400470 NUTM2AQ8IVF1 878 aaPredicted RBP8.03□□□□□ -1.12
RAB6A-203ENST00000400470 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
RAB6A-203ENST00000400470 FBXO31Q5XUX0 539 aaPredicted RBP8.02□□□□□ -1.13
RAB6A-203ENST00000400470 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
RAB6A-203ENST00000400470 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
RAB6A-203ENST00000400470 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
RAB6A-203ENST00000400470 TSC1Q92574 1164 aa8.01□□□□□ -1.13
RAB6A-203ENST00000400470 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
RAB6A-203ENST00000400470 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
RAB6A-203ENST00000400470 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
RAB6A-203ENST00000400470 FOXJ1Q92949 421 aa8□□□□□ -1.13
RAB6A-203ENST00000400470 C11orf95C9JLR9 678 aaPredicted RBP7.99□□□□□ -1.13
RAB6A-203ENST00000400470 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
RAB6A-203ENST00000400470 MPNDQ8N594 471 aa7.99□□□□□ -1.13
RAB6A-203ENST00000400470 WASF2Q9Y6W5 498 aa7.99□□□□□ -1.13
RAB6A-203ENST00000400470 PRKCSHP14314 528 aaPredicted RBP7.98□□□□□ -1.13
RAB6A-203ENST00000400470 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
RAB6A-203ENST00000400470 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
RAB6A-203ENST00000400470 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
RAB6A-203ENST00000400470 SNRPBP14678 240 aaKnown RBP7.97□□□□□ -1.13
RAB6A-203ENST00000400470 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
RAB6A-203ENST00000400470 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
RAB6A-203ENST00000400470 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
RAB6A-203ENST00000400470 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
RAB6A-203ENST00000400470 TRIM47Q96LD4 638 aa7.96□□□□□ -1.14
RAB6A-203ENST00000400470 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.14
RAB6A-203ENST00000400470 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
RAB6A-203ENST00000400470 NNTQ13423 1086 aa7.95□□□□□ -1.14
RAB6A-203ENST00000400470 TRIM46Q7Z4K8 759 aa7.95□□□□□ -1.14
RAB6A-203ENST00000400470 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
RAB6A-203ENST00000400470 CDK15Q96Q40 435 aa7.95□□□□□ -1.14
RAB6A-203ENST00000400470 BMP1P13497 986 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 PPP2R2DQ66LE6 453 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 TREML4Q6UXN2 200 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 SH3BP5LQ7L8J4 393 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 SH3RF1Q7Z6J0 888 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 C1QTNF2Q9BXJ5 285 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 KLF16Q9BXK1 252 aaPredicted RBP7.93□□□□□ -1.14
RAB6A-203ENST00000400470 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
RAB6A-203ENST00000400470 ADH1CP00326 375 aa7.92□□□□□ -1.14
RAB6A-203ENST00000400470 AGERQ15109 404 aa7.92□□□□□ -1.14
RAB6A-203ENST00000400470 BPHLQ86WA6 291 aaPredicted RBP7.92□□□□□ -1.14
RAB6A-203ENST00000400470 ARMC2Q8NEN0 867 aa7.92□□□□□ -1.14
RAB6A-203ENST00000400470 TIMP2P16035 220 aa7.91□□□□□ -1.14
RAB6A-203ENST00000400470 GRM5P41594 1212 aa7.91□□□□□ -1.14
RAB6A-203ENST00000400470 NR3C2P08235 984 aa7.9□□□□□ -1.14
RAB6A-203ENST00000400470 ARID5BQ14865 1188 aa7.9□□□□□ -1.14
RAB6A-203ENST00000400470 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
RAB6A-203ENST00000400470 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
RAB6A-203ENST00000400470 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
RAB6A-203ENST00000400470 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
RAB6A-203ENST00000400470 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
RAB6A-203ENST00000400470 AP1G2O75843 785 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 WFS1O76024 890 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 NR5A1Q13285 461 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 NR6A1Q15406 480 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 TRMT44Q8IYL2 757 aaKnown RBP7.87□□□□□ -1.15
RAB6A-203ENST00000400470 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.15
RAB6A-203ENST00000400470 ZFP42Q96MM3 310 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
RAB6A-203ENST00000400470 MAGEB6P1A0A0J9YX57 407 aa7.86□□□□□ -1.15
RAB6A-203ENST00000400470 ERFEQ4G0M1 354 aa7.86□□□□□ -1.15
RAB6A-203ENST00000400470 MRPL14Q6P1L8 145 aaKnown RBP7.86□□□□□ -1.15
RAB6A-203ENST00000400470 ITPKCQ96DU7 683 aa7.86□□□□□ -1.15
RAB6A-203ENST00000400470 FKBPLQ9UIM3 349 aa7.86□□□□□ -1.15
RAB6A-203ENST00000400470 ATP1B4Q9UN42 357 aaPredicted RBP7.86□□□□□ -1.15
RAB6A-203ENST00000400470 MAP4K5Q9Y4K4 846 aa7.86□□□□□ -1.15
RAB6A-203ENST00000400470 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
RAB6A-203ENST00000400470 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
RAB6A-203ENST00000400470 NEUROD2Q15784 382 aa7.85□□□□□ -1.15
RAB6A-203ENST00000400470 PDXDC2PQ6P474 469 aa7.85□□□□□ -1.15
RAB6A-203ENST00000400470 EPS8L1Q8TE68 723 aa7.85□□□□□ -1.15
RAB6A-203ENST00000400470 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
RAB6A-203ENST00000400470 CARD14Q9BXL6 1004 aa7.85□□□□□ -1.15
RAB6A-203ENST00000400470 HMX1Q9NP08 348 aaPredicted RBP7.85□□□□□ -1.15
RAB6A-203ENST00000400470 RFC5P40937 340 aa7.84□□□□□ -1.15
RAB6A-203ENST00000400470 GOPCQ9HD26 462 aa7.84□□□□□ -1.15
RAB6A-203ENST00000400470 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
RAB6A-203ENST00000400470 FSHRP23945 695 aa7.83□□□□□ -1.16
RAB6A-203ENST00000400470 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
RAB6A-203ENST00000400470 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
RAB6A-203ENST00000400470 BRPF1P55201 1214 aaPredicted RBP7.82□□□□□ -1.16
RAB6A-203ENST00000400470 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
RAB6A-203ENST00000400470 ARHGAP9Q9BRR9 750 aa7.82□□□□□ -1.16
RAB6A-203ENST00000400470 ZC3H4Q9UPT8 1303 aaKnown RBP7.81□□□□□ -1.16
RAB6A-203ENST00000400470 SCARF1Q14162 830 aa7.8□□□□□ -1.16
RAB6A-203ENST00000400470 MEIOBQ8N635 442 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms