RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 BCCIPQ9P287 314 aaKnown RBP eCLIP10.63□□□□□ -0.71
RETREG1-202ENST00000399793 KRT222Q8N1A0 295 aa10.63□□□□□ -0.71
RETREG1-202ENST00000399793 RARSP54136 660 aaKnown RBP10.62□□□□□ -0.71
RETREG1-202ENST00000399793 PKD2Q13563 968 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 CHAMP1Q96JM3 812 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 PLXNC1O60486 1568 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 HNRNPH2P55795 449 aaKnown RBP10.62□□□□□ -0.71
RETREG1-202ENST00000399793 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 CNPY4Q8N129 248 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 KIAA1524Q8TCG1 905 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 RSPH14Q9UHP6 348 aa10.62□□□□□ -0.71
RETREG1-202ENST00000399793 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
RETREG1-202ENST00000399793 SYCP1Q15431 976 aa10.61□□□□□ -0.71
RETREG1-202ENST00000399793 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
RETREG1-202ENST00000399793 DISP3Q9P2K9 1392 aa10.61□□□□□ -0.71
RETREG1-202ENST00000399793 RAD51AP2Q09MP3 1159 aa10.61□□□□□ -0.71
RETREG1-202ENST00000399793 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
RETREG1-202ENST00000399793 ADCY5O95622 1261 aa10.6□□□□□ -0.71
RETREG1-202ENST00000399793 DAPK1P53355 1430 aa10.6□□□□□ -0.71
RETREG1-202ENST00000399793 PYCARDQ9ULZ3 195 aa10.6□□□□□ -0.71
RETREG1-202ENST00000399793 ARHGEF12Q9NZN5 1544 aa10.6□□□□□ -0.71
RETREG1-202ENST00000399793 COL17A1Q9UMD9 1497 aaPredicted RBP10.6□□□□□ -0.71
RETREG1-202ENST00000399793 NOP2P46087 812 aaKnown RBP10.6□□□□□ -0.71
RETREG1-202ENST00000399793 MBD3O95983 291 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
RETREG1-202ENST00000399793 AXDND1Q5T1B0 1012 aaPredicted RBP10.59□□□□□ -0.71
RETREG1-202ENST00000399793 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 TMX1Q9H3N1 280 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 ZDHHC9Q9Y397 364 aa10.59□□□□□ -0.71
RETREG1-202ENST00000399793 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
RETREG1-202ENST00000399793 FAM193AP78312 1265 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 SIRT1Q96EB6 747 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 ST7Q9NRC1 585 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 CYP2C19P33261 490 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 ZNF622Q969S3 477 aaKnown RBP eCLIP10.58□□□□□ -0.72
RETREG1-202ENST00000399793 ABCC2Q92887 1545 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
RETREG1-202ENST00000399793 KCNF1Q9H3M0 494 aa10.58□□□□□ -0.72
RETREG1-202ENST00000399793 ABCC5O15440 1437 aa10.57□□□□□ -0.72
RETREG1-202ENST00000399793 DHX16O60231 1041 aaKnown RBP10.57□□□□□ -0.72
RETREG1-202ENST00000399793 FAM53CQ9NYF3 392 aa10.57□□□□□ -0.72
RETREG1-202ENST00000399793 CREBRFQ8IUR6 639 aa10.57□□□□□ -0.72
RETREG1-202ENST00000399793 TESK2Q96S53 571 aa10.57□□□□□ -0.72
RETREG1-202ENST00000399793 RASSF4Q9H2L5 321 aa10.57□□□□□ -0.72
RETREG1-202ENST00000399793 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
RETREG1-202ENST00000399793 ZGPATQ8N5A5 531 aaKnown RBP10.56□□□□□ -0.72
RETREG1-202ENST00000399793 FAM184AQ8NB25 1140 aa10.56□□□□□ -0.72
RETREG1-202ENST00000399793 CWC22Q9HCG8 908 aaKnown RBP10.56□□□□□ -0.72
RETREG1-202ENST00000399793 KNSTRNQ9Y448 316 aa10.56□□□□□ -0.72
RETREG1-202ENST00000399793 SMTNL1A8MU46 457 aa10.56□□□□□ -0.72
RETREG1-202ENST00000399793 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
RETREG1-202ENST00000399793 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
RETREG1-202ENST00000399793 FOXD4L5Q5VV16 416 aaPredicted RBP10.55□□□□□ -0.72
RETREG1-202ENST00000399793 FOXD4L4Q8WXT5 416 aaPredicted RBP10.55□□□□□ -0.72
RETREG1-202ENST00000399793 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
RETREG1-202ENST00000399793 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
RETREG1-202ENST00000399793 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
RETREG1-202ENST00000399793 MYCBPQ99417 103 aaPredicted RBP10.55□□□□□ -0.72
RETREG1-202ENST00000399793 NOL10Q9BSC4 688 aaKnown RBP10.55□□□□□ -0.72
RETREG1-202ENST00000399793 DNMT1P26358 1616 aaKnown RBP10.54□□□□□ -0.72
RETREG1-202ENST00000399793 LMOD3Q0VAK6 560 aa10.54□□□□□ -0.72
RETREG1-202ENST00000399793 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
RETREG1-202ENST00000399793 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
RETREG1-202ENST00000399793 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
RETREG1-202ENST00000399793 ICE2Q659A1 982 aa10.54□□□□□ -0.72
RETREG1-202ENST00000399793 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
RETREG1-202ENST00000399793 GYS2P54840 703 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 NUCB1Q02818 461 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 RABEP1Q15276 862 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 ERBINQ96RT1 1412 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 REC8O95072 547 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 PLCB2Q00722 1185 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
RETREG1-202ENST00000399793 DZIP1LQ8IYY4 767 aaKnown RBP10.53□□□□□ -0.72
RETREG1-202ENST00000399793 SMC4Q9NTJ3 1288 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 MAGI2Q86UL8 1455 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 KDM4AO75164 1064 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 PHF14O94880 888 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.53□□□□□ -0.72
RETREG1-202ENST00000399793 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
RETREG1-202ENST00000399793 GRIN2AQ12879 1464 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 HAP1P54257 671 aaPredicted RBP10.52□□□□□ -0.72
RETREG1-202ENST00000399793 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.72
RETREG1-202ENST00000399793 TMF1P82094 1093 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 CTR9Q6PD62 1173 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 C10orf67Q8IYJ2 551 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 BANK1Q8NDB2 785 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 KIF1BPQ96EK5 621 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 C16orf45Q96MC5 204 aaPredicted RBP10.52□□□□□ -0.72
RETREG1-202ENST00000399793 ZNF446Q9NWS9 450 aa10.52□□□□□ -0.72
RETREG1-202ENST00000399793 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
RETREG1-202ENST00000399793 CEP170Q5SW79 1584 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms