RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
ITSN1-208ENST00000399349 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
ITSN1-208ENST00000399349 SIL1Q9H173 461 aa15.82■□□□□ 0.12
ITSN1-208ENST00000399349 CFTRP13569 1480 aa15.82■□□□□ 0.12
ITSN1-208ENST00000399349 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
ITSN1-208ENST00000399349 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
ITSN1-208ENST00000399349 HDGFL1Q5TGJ6 251 aa15.81■□□□□ 0.12
ITSN1-208ENST00000399349 PSMA5P28066 241 aa15.81■□□□□ 0.12
ITSN1-208ENST00000399349 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
ITSN1-208ENST00000399349 CCDC43Q96MW1 224 aaKnown RBP15.81■□□□□ 0.12
ITSN1-208ENST00000399349 STK3Q13188 491 aa15.8■□□□□ 0.12
ITSN1-208ENST00000399349 PDE3AQ14432 1141 aa15.8■□□□□ 0.12
ITSN1-208ENST00000399349 NINLQ9Y2I6 1382 aa15.8■□□□□ 0.12
ITSN1-208ENST00000399349 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
ITSN1-208ENST00000399349 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
ITSN1-208ENST00000399349 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
ITSN1-208ENST00000399349 GNAI2P04899 355 aa15.79■□□□□ 0.12
ITSN1-208ENST00000399349 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
ITSN1-208ENST00000399349 CUX1P39880 1505 aa15.78■□□□□ 0.12
ITSN1-208ENST00000399349 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
ITSN1-208ENST00000399349 SPC24Q8NBT2 197 aa15.78■□□□□ 0.12
ITSN1-208ENST00000399349 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
ITSN1-208ENST00000399349 KINO60870 393 aaKnown RBP15.78■□□□□ 0.12
ITSN1-208ENST00000399349 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
ITSN1-208ENST00000399349 RABEP1Q15276 862 aa15.77■□□□□ 0.12
ITSN1-208ENST00000399349 SKAP1Q86WV1 359 aa15.77■□□□□ 0.12
ITSN1-208ENST00000399349 OFD1O75665 1012 aa15.77■□□□□ 0.11
ITSN1-208ENST00000399349 SMC2O95347 1197 aa15.77■□□□□ 0.11
ITSN1-208ENST00000399349 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.11
ITSN1-208ENST00000399349 SETQ01105 290 aaPredicted RBP15.77■□□□□ 0.11
ITSN1-208ENST00000399349 GCC1Q96CN9 775 aa15.77■□□□□ 0.11
ITSN1-208ENST00000399349 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
ITSN1-208ENST00000399349 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 ATF7IPQ6VMQ6 1270 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 CDK19Q9BWU1 502 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 NAT10Q9H0A0 1025 aaKnown RBP15.76■□□□□ 0.11
ITSN1-208ENST00000399349 MBD3O95983 291 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 IKQ13123 557 aaPredicted RBP15.76■□□□□ 0.11
ITSN1-208ENST00000399349 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
ITSN1-208ENST00000399349 RRS1Q15050 365 aaKnown RBP15.75■□□□□ 0.11
ITSN1-208ENST00000399349 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
ITSN1-208ENST00000399349 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
ITSN1-208ENST00000399349 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
ITSN1-208ENST00000399349 IL1RAPL2Q9NP60 686 aa15.75■□□□□ 0.11
ITSN1-208ENST00000399349 CT47A1Q5JQC4 288 aaPredicted RBP15.74■□□□□ 0.11
ITSN1-208ENST00000399349 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 MYL6BP14649 208 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 BRMS1Q9HCU9 246 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 RUFY1Q96T51 708 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 XBP1P17861 261 aa15.74■□□□□ 0.11
ITSN1-208ENST00000399349 ARGLU1Q9NWB6 273 aaPredicted RBP15.74■□□□□ 0.11
ITSN1-208ENST00000399349 STK38Q15208 465 aa15.73■□□□□ 0.11
ITSN1-208ENST00000399349 PDCP20941 246 aa15.73■□□□□ 0.11
ITSN1-208ENST00000399349 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
ITSN1-208ENST00000399349 SLC26A8Q96RN1 970 aa15.73■□□□□ 0.11
ITSN1-208ENST00000399349 RBM10P98175 930 aaKnown RBP15.73■□□□□ 0.11
ITSN1-208ENST00000399349 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
ITSN1-208ENST00000399349 MVPQ14764 893 aaKnown RBP15.73■□□□□ 0.11
ITSN1-208ENST00000399349 DDX54Q8TDD1 881 aaKnown RBP15.73■□□□□ 0.11
ITSN1-208ENST00000399349 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
ITSN1-208ENST00000399349 RRBP1Q9P2E9 1410 aaKnown RBP15.72■□□□□ 0.11
ITSN1-208ENST00000399349 ZNF530Q6P9A1 599 aaPredicted RBP15.72■□□□□ 0.11
ITSN1-208ENST00000399349 THUMPD2Q9BTF0 503 aaKnown RBP15.72■□□□□ 0.11
ITSN1-208ENST00000399349 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
ITSN1-208ENST00000399349 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
ITSN1-208ENST00000399349 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
ITSN1-208ENST00000399349 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
ITSN1-208ENST00000399349 EPS15P42566 896 aa15.71■□□□□ 0.11
ITSN1-208ENST00000399349 PROSER2Q86WR7 435 aaPredicted RBP15.71■□□□□ 0.11
ITSN1-208ENST00000399349 MCM2P49736 904 aa15.71■□□□□ 0.11
ITSN1-208ENST00000399349 RRP9O43818 475 aaKnown RBP15.71■□□□□ 0.11
ITSN1-208ENST00000399349 CYP46A1Q9Y6A2 500 aa15.71■□□□□ 0.11
ITSN1-208ENST00000399349 CHD1LQ86WJ1 897 aa15.71■□□□□ 0.1
ITSN1-208ENST00000399349 SKIDA1Q1XH10 827 aa15.7■□□□□ 0.1
ITSN1-208ENST00000399349 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
ITSN1-208ENST00000399349 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
ITSN1-208ENST00000399349 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
ITSN1-208ENST00000399349 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
ITSN1-208ENST00000399349 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
ITSN1-208ENST00000399349 ME1P48163 572 aa15.69■□□□□ 0.1
ITSN1-208ENST00000399349 SCAPERQ9BY12 1400 aa15.69■□□□□ 0.1
ITSN1-208ENST00000399349 XPCQ01831 940 aaPredicted RBP15.69■□□□□ 0.1
ITSN1-208ENST00000399349 TTC39AQ5SRH9 613 aa15.69■□□□□ 0.1
ITSN1-208ENST00000399349 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
ITSN1-208ENST00000399349 CCT4P50991 539 aaKnown RBP15.68■□□□□ 0.1
ITSN1-208ENST00000399349 CCDC158Q5M9N0 1113 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 ZMYND15Q9H091 742 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 EXOC6BQ9Y2D4 811 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
ITSN1-208ENST00000399349 FKBP4Q02790 459 aaKnown RBP eCLIP15.68■□□□□ 0.1
ITSN1-208ENST00000399349 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
ITSN1-208ENST00000399349 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
ITSN1-208ENST00000399349 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
ITSN1-208ENST00000399349 HIP1O00291 1037 aa15.67■□□□□ 0.1
ITSN1-208ENST00000399349 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms