RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
LINC00243-201ENST00000399196 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
LINC00243-201ENST00000399196 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
LINC00243-201ENST00000399196 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
LINC00243-201ENST00000399196 ATP7BP35670 1465 aa12.55□□□□□ -0.4
LINC00243-201ENST00000399196 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
LINC00243-201ENST00000399196 POLR3AO14802 1390 aaPredicted RBP12.54□□□□□ -0.4
LINC00243-201ENST00000399196 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
LINC00243-201ENST00000399196 FYB1O15117 783 aa12.52□□□□□ -0.4
LINC00243-201ENST00000399196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.4
LINC00243-201ENST00000399196 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 ZNF521Q96K83 1311 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 MTHFSP49914 203 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.41
LINC00243-201ENST00000399196 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
LINC00243-201ENST00000399196 LRRC7Q96NW7 1537 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
LINC00243-201ENST00000399196 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 PDE3BQ13370 1112 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
LINC00243-201ENST00000399196 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
LINC00243-201ENST00000399196 LTBP4Q8N2S1 1624 aa12.5□□□□□ -0.41
LINC00243-201ENST00000399196 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
LINC00243-201ENST00000399196 APAF1O14727 1248 aa12.49□□□□□ -0.41
LINC00243-201ENST00000399196 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
LINC00243-201ENST00000399196 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
LINC00243-201ENST00000399196 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
LINC00243-201ENST00000399196 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
LINC00243-201ENST00000399196 ACEP12821 1306 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 FBLN1P23142 703 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
LINC00243-201ENST00000399196 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
LINC00243-201ENST00000399196 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
LINC00243-201ENST00000399196 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 ERICH6BQ5W0A0 696 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 NGDNQ8NEJ9 315 aaKnown RBP12.46□□□□□ -0.42
LINC00243-201ENST00000399196 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.42
LINC00243-201ENST00000399196 NME9Q86XW9 330 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 AKAP12Q02952 1782 aa12.45□□□□□ -0.42
LINC00243-201ENST00000399196 COG3Q96JB2 828 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 IQSEC2Q5JU85 1478 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 RRP1P56182 461 aaKnown RBP12.44□□□□□ -0.42
LINC00243-201ENST00000399196 B4GALNT3Q6L9W6 998 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
LINC00243-201ENST00000399196 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
LINC00243-201ENST00000399196 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
LINC00243-201ENST00000399196 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
LINC00243-201ENST00000399196 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 USP6P35125 1406 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 MST1RQ04912 1400 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
LINC00243-201ENST00000399196 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
LINC00243-201ENST00000399196 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
LINC00243-201ENST00000399196 MSH6P52701 1360 aa12.41□□□□□ -0.42
LINC00243-201ENST00000399196 DCCP43146 1447 aa12.41□□□□□ -0.42
LINC00243-201ENST00000399196 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 PLIN1O60240 522 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00243-201ENST00000399196 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
LINC00243-201ENST00000399196 U2SURPO15042 1029 aaKnown RBP12.39□□□□□ -0.43
LINC00243-201ENST00000399196 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
LINC00243-201ENST00000399196 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
LINC00243-201ENST00000399196 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 ATF3P18847 181 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
LINC00243-201ENST00000399196 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
LINC00243-201ENST00000399196 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
LINC00243-201ENST00000399196 CADPS2Q86UW7 1296 aa12.36□□□□□ -0.43
LINC00243-201ENST00000399196 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
LINC00243-201ENST00000399196 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
LINC00243-201ENST00000399196 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
LINC00243-201ENST00000399196 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms