RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 MTHFSP49914 203 aa11.28□□□□□ -0.6
CDH23-203ENST00000398788 SLC52A1Q9NWF4 448 aa11.27□□□□□ -0.6
CDH23-203ENST00000398788 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.6
CDH23-203ENST00000398788 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
CDH23-203ENST00000398788 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
CDH23-203ENST00000398788 PLEKHH2Q8IVE3 1493 aa11.27□□□□□ -0.61
CDH23-203ENST00000398788 SYCE3A1L190 88 aa11.27□□□□□ -0.61
CDH23-203ENST00000398788 BRD2P25440 801 aaKnown RBP11.27□□□□□ -0.61
CDH23-203ENST00000398788 NBPF8Q3BBV2 869 aa11.27□□□□□ -0.61
CDH23-203ENST00000398788 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
CDH23-203ENST00000398788 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 MIA2Q96PC5 1412 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 PCF11O94913 1555 aaKnown RBP11.26□□□□□ -0.61
CDH23-203ENST00000398788 TBC1D32Q96NH3 1257 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 ST18O60284 1047 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 SSFA2P28290 1259 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 C9orf78Q9NZ63 289 aaPredicted RBP11.26□□□□□ -0.61
CDH23-203ENST00000398788 TNNT1P13805 278 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
CDH23-203ENST00000398788 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
CDH23-203ENST00000398788 C9orf84Q5VXU9 1444 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 IGHDP01880 384 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
CDH23-203ENST00000398788 TMX1Q9H3N1 280 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
CDH23-203ENST00000398788 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
CDH23-203ENST00000398788 TMEM51Q9NW97 253 aa11.24□□□□□ -0.61
CDH23-203ENST00000398788 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
CDH23-203ENST00000398788 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
CDH23-203ENST00000398788 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
CDH23-203ENST00000398788 CD109Q6YHK3 1445 aa11.24□□□□□ -0.61
CDH23-203ENST00000398788 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
CDH23-203ENST00000398788 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
CDH23-203ENST00000398788 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 TEX35Q5T0J7 233 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
CDH23-203ENST00000398788 HDAC5Q9UQL6 1122 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
CDH23-203ENST00000398788 SF3A1Q15459 793 aaKnown RBP11.23□□□□□ -0.61
CDH23-203ENST00000398788 RASSF8Q8NHQ8 419 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
CDH23-203ENST00000398788 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 GTF2F1P35269 517 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDH23-203ENST00000398788 ANO2Q9NQ90 1003 aa11.23□□□□□ -0.61
CDH23-203ENST00000398788 PHF14O94880 888 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 MCM5P33992 734 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 GTF2A1P52655 376 aaPredicted RBP11.22□□□□□ -0.61
CDH23-203ENST00000398788 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 NLRP6P59044 892 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 SLC26A8Q96RN1 970 aa11.22□□□□□ -0.61
CDH23-203ENST00000398788 NUCB2P80303 420 aa11.21□□□□□ -0.61
CDH23-203ENST00000398788 TSPYL1Q9H0U9 437 aa11.21□□□□□ -0.61
CDH23-203ENST00000398788 TSPY26PQ9H489 355 aa11.21□□□□□ -0.61
CDH23-203ENST00000398788 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.61
CDH23-203ENST00000398788 HTATSF1O43719 755 aaKnown RBP11.21□□□□□ -0.61
CDH23-203ENST00000398788 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.61
CDH23-203ENST00000398788 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.62
CDH23-203ENST00000398788 MYRIPQ8NFW9 859 aa11.21□□□□□ -0.62
CDH23-203ENST00000398788 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.62
CDH23-203ENST00000398788 C17orf53Q8N3J3 647 aaPredicted RBP11.21□□□□□ -0.62
CDH23-203ENST00000398788 CIZ1Q9ULV3 898 aaPredicted RBP11.21□□□□□ -0.62
CDH23-203ENST00000398788 POGZQ7Z3K3 1410 aa11.2□□□□□ -0.62
CDH23-203ENST00000398788 NOLC1Q14978 699 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH23-203ENST00000398788 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
CDH23-203ENST00000398788 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
CDH23-203ENST00000398788 HFM1A2PYH4 1435 aa11.2□□□□□ -0.62
CDH23-203ENST00000398788 TTC12Q9H892 705 aaPredicted RBP11.2□□□□□ -0.62
CDH23-203ENST00000398788 KLHL40Q2TBA0 621 aa11.2□□□□□ -0.62
CDH23-203ENST00000398788 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
CDH23-203ENST00000398788 G3V3G9 751 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 NEXNQ0ZGT2 675 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 HS1BP3Q53T59 392 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 CHMP4CQ96CF2 233 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 ANTXR1Q9H6X2 564 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 NLRP2Q9NX02 1062 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
CDH23-203ENST00000398788 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
CDH23-203ENST00000398788 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
CDH23-203ENST00000398788 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 GPS2Q13227 327 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 PRAM1Q96QH2 718 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 USP25Q9UHP3 1055 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 H3BQV1 296 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 CCDC112Q8NEF3 446 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
CDH23-203ENST00000398788 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
CDH23-203ENST00000398788 ZNF500O60304 480 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms