RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
CFAP53-201ENST00000398545 TMPOP42166 694 aaKnown RBP19.34■□□□□ 0.69
CFAP53-201ENST00000398545 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.69
CFAP53-201ENST00000398545 KIF16BQ96L93 1317 aa19.33■□□□□ 0.68
CFAP53-201ENST00000398545 PNPLA6Q8IY17 1366 aa19.33■□□□□ 0.68
CFAP53-201ENST00000398545 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
CFAP53-201ENST00000398545 SMC4Q9NTJ3 1288 aa19.33■□□□□ 0.68
CFAP53-201ENST00000398545 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
CFAP53-201ENST00000398545 TBC1D2Q9BYX2 928 aa19.31■□□□□ 0.68
CFAP53-201ENST00000398545 TRIM35Q9UPQ4 493 aa19.31■□□□□ 0.68
CFAP53-201ENST00000398545 TRIM27P14373 513 aa19.31■□□□□ 0.68
CFAP53-201ENST00000398545 EXOSC9Q06265 439 aaKnown RBP19.31■□□□□ 0.68
CFAP53-201ENST00000398545 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
CFAP53-201ENST00000398545 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
CFAP53-201ENST00000398545 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
CFAP53-201ENST00000398545 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
CFAP53-201ENST00000398545 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
CFAP53-201ENST00000398545 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
CFAP53-201ENST00000398545 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
CFAP53-201ENST00000398545 IPO8O15397 1037 aaKnown RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 ALDH1L2Q3SY69 923 aa19.28■□□□□ 0.68
CFAP53-201ENST00000398545 TSR2Q969E8 191 aaKnown RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 SLKQ9H2G2 1235 aaPredicted RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 REREQ9P2R6 1566 aa19.28■□□□□ 0.68
CFAP53-201ENST00000398545 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
CFAP53-201ENST00000398545 MAP2P11137 1827 aaKnown RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 L1TD1Q5T7N2 865 aaKnown RBP19.28■□□□□ 0.68
CFAP53-201ENST00000398545 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
CFAP53-201ENST00000398545 U2SURPO15042 1029 aaKnown RBP19.27■□□□□ 0.68
CFAP53-201ENST00000398545 ATP7BP35670 1465 aa19.27■□□□□ 0.68
CFAP53-201ENST00000398545 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.67
CFAP53-201ENST00000398545 FYB1O15117 783 aa19.26■□□□□ 0.67
CFAP53-201ENST00000398545 BRPF1P55201 1214 aaPredicted RBP19.26■□□□□ 0.67
CFAP53-201ENST00000398545 IDI1Q13907 227 aa19.26■□□□□ 0.67
CFAP53-201ENST00000398545 FAM135BQ49AJ0 1406 aa19.26■□□□□ 0.67
CFAP53-201ENST00000398545 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
CFAP53-201ENST00000398545 DIAPH1O60610 1272 aaKnown RBP19.25■□□□□ 0.67
CFAP53-201ENST00000398545 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
CFAP53-201ENST00000398545 FAM43AQ8N2R8 423 aa19.25■□□□□ 0.67
CFAP53-201ENST00000398545 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
CFAP53-201ENST00000398545 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
CFAP53-201ENST00000398545 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
CFAP53-201ENST00000398545 ZBTB40Q9NUA8 1239 aa19.24■□□□□ 0.67
CFAP53-201ENST00000398545 POGKQ9P215 609 aa19.24■□□□□ 0.67
CFAP53-201ENST00000398545 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
CFAP53-201ENST00000398545 FCHSD2O94868 740 aa19.23■□□□□ 0.67
CFAP53-201ENST00000398545 RIPK4P57078 832 aa19.22■□□□□ 0.67
CFAP53-201ENST00000398545 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
CFAP53-201ENST00000398545 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
CFAP53-201ENST00000398545 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
CFAP53-201ENST00000398545 DLG5Q8TDM6 1919 aa19.22■□□□□ 0.67
CFAP53-201ENST00000398545 NUTM2DQ5VT03 806 aaPredicted RBP19.21■□□□□ 0.67
CFAP53-201ENST00000398545 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
CFAP53-201ENST00000398545 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
CFAP53-201ENST00000398545 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
CFAP53-201ENST00000398545 PIK3R4Q99570 1358 aa19.21■□□□□ 0.67
CFAP53-201ENST00000398545 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
CFAP53-201ENST00000398545 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
CFAP53-201ENST00000398545 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
CFAP53-201ENST00000398545 NUCB1Q02818 461 aa19.19■□□□□ 0.66
CFAP53-201ENST00000398545 CALD1Q05682 793 aaKnown RBP19.19■□□□□ 0.66
CFAP53-201ENST00000398545 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
CFAP53-201ENST00000398545 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
CFAP53-201ENST00000398545 MFAP1P55081 439 aaKnown RBP19.18■□□□□ 0.66
CFAP53-201ENST00000398545 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
CFAP53-201ENST00000398545 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
CFAP53-201ENST00000398545 MCM4P33991 863 aa19.18■□□□□ 0.66
CFAP53-201ENST00000398545 ARHGAP45Q92619 1136 aa19.18■□□□□ 0.66
CFAP53-201ENST00000398545 STK26Q9P289 416 aa19.18■□□□□ 0.66
CFAP53-201ENST00000398545 RAPGEF3O95398 923 aa19.17■□□□□ 0.66
CFAP53-201ENST00000398545 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
CFAP53-201ENST00000398545 SNX21Q969T3 373 aa19.17■□□□□ 0.66
CFAP53-201ENST00000398545 CDK12Q9NYV4 1490 aaPredicted RBP19.17■□□□□ 0.66
CFAP53-201ENST00000398545 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
CFAP53-201ENST00000398545 KNDC1Q76NI1 1749 aa19.16■□□□□ 0.66
CFAP53-201ENST00000398545 RSPH6AQ9H0K4 717 aa19.16■□□□□ 0.66
CFAP53-201ENST00000398545 ANO8Q9HCE9 1232 aaPredicted RBP19.16■□□□□ 0.66
CFAP53-201ENST00000398545 GCC1Q96CN9 775 aa19.15■□□□□ 0.66
CFAP53-201ENST00000398545 AKAP12Q02952 1782 aa19.15■□□□□ 0.66
CFAP53-201ENST00000398545 BMP2KLQ5H9B9 411 aa19.14■□□□□ 0.65
CFAP53-201ENST00000398545 ITSN1Q15811 1721 aa19.14■□□□□ 0.65
CFAP53-201ENST00000398545 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
CFAP53-201ENST00000398545 CHD1LQ86WJ1 897 aa19.14■□□□□ 0.65
CFAP53-201ENST00000398545 CDK19Q9BWU1 502 aa19.14■□□□□ 0.65
CFAP53-201ENST00000398545 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
CFAP53-201ENST00000398545 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
CFAP53-201ENST00000398545 SPATA31D1Q6ZQQ2 1576 aa19.12■□□□□ 0.65
CFAP53-201ENST00000398545 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
CFAP53-201ENST00000398545 NFE2L2Q16236 605 aa19.12■□□□□ 0.65
CFAP53-201ENST00000398545 ISY1Q9ULR0 285 aaKnown RBP19.12■□□□□ 0.65
CFAP53-201ENST00000398545 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
CFAP53-201ENST00000398545 AGLP35573 1532 aa19.12■□□□□ 0.65
CFAP53-201ENST00000398545 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
CFAP53-201ENST00000398545 DDIT3P35638 169 aa19.11■□□□□ 0.65
CFAP53-201ENST00000398545 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
CFAP53-201ENST00000398545 AATKQ6ZMQ8 1374 aa19.11■□□□□ 0.65
CFAP53-201ENST00000398545 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
CFAP53-201ENST00000398545 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
CFAP53-201ENST00000398545 PRKAR2BP31323 418 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms