RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
PPME1-202ENST00000398427 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
PPME1-202ENST00000398427 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
PPME1-202ENST00000398427 PER1O15534 1290 aaPredicted RBP15.68■□□□□ 0.1
PPME1-202ENST00000398427 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
PPME1-202ENST00000398427 EDC4Q6P2E9 1401 aaKnown RBP15.68■□□□□ 0.1
PPME1-202ENST00000398427 PXDNQ92626 1479 aa15.67■□□□□ 0.1
PPME1-202ENST00000398427 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
PPME1-202ENST00000398427 AHDC1Q5TGY3 1603 aaPredicted RBP15.66■□□□□ 0.1
PPME1-202ENST00000398427 PSME1Q06323 249 aa15.66■□□□□ 0.1
PPME1-202ENST00000398427 KRT28Q7Z3Y7 464 aa15.65■□□□□ 0.1
PPME1-202ENST00000398427 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.1
PPME1-202ENST00000398427 TTC21BQ7Z4L5 1316 aa15.64■□□□□ 0.09
PPME1-202ENST00000398427 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
PPME1-202ENST00000398427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.63■□□□□ 0.09
PPME1-202ENST00000398427 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
PPME1-202ENST00000398427 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
PPME1-202ENST00000398427 SOS2Q07890 1332 aaPredicted RBP15.63■□□□□ 0.09
PPME1-202ENST00000398427 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
PPME1-202ENST00000398427 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
PPME1-202ENST00000398427 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
PPME1-202ENST00000398427 COL16A1Q07092 1604 aaPredicted RBP15.61■□□□□ 0.09
PPME1-202ENST00000398427 CGNL1Q0VF96 1302 aa15.61■□□□□ 0.09
PPME1-202ENST00000398427 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
PPME1-202ENST00000398427 SBNO1A3KN83 1393 aa15.61■□□□□ 0.09
PPME1-202ENST00000398427 TTC21AQ8NDW8 1320 aa15.61■□□□□ 0.09
PPME1-202ENST00000398427 NME9Q86XW9 330 aa15.6■□□□□ 0.09
PPME1-202ENST00000398427 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
PPME1-202ENST00000398427 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
PPME1-202ENST00000398427 FYB1O15117 783 aa15.6■□□□□ 0.09
PPME1-202ENST00000398427 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
PPME1-202ENST00000398427 USP54Q70EL1 1684 aa15.59■□□□□ 0.09
PPME1-202ENST00000398427 SPATA31A3Q5VYP0 1347 aa15.59■□□□□ 0.09
PPME1-202ENST00000398427 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.09
PPME1-202ENST00000398427 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.09
PPME1-202ENST00000398427 ZRANB1Q9UGI0 708 aa15.58■□□□□ 0.09
PPME1-202ENST00000398427 NPC1L1Q9UHC9 1359 aa15.58■□□□□ 0.08
PPME1-202ENST00000398427 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.08
PPME1-202ENST00000398427 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
PPME1-202ENST00000398427 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
PPME1-202ENST00000398427 ABTB2Q8N961 1025 aa15.57■□□□□ 0.08
PPME1-202ENST00000398427 NUTM2GQ5VZR2 741 aa15.57■□□□□ 0.08
PPME1-202ENST00000398427 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
PPME1-202ENST00000398427 NSD2O96028 1365 aa15.57■□□□□ 0.08
PPME1-202ENST00000398427 USP31Q70CQ4 1352 aa15.56■□□□□ 0.08
PPME1-202ENST00000398427 LMOD2Q6P5Q4 547 aa15.56■□□□□ 0.08
PPME1-202ENST00000398427 CRYBG1Q9Y4K1 1723 aa15.55■□□□□ 0.08
PPME1-202ENST00000398427 ARHGEF10O15013 1369 aa15.54■□□□□ 0.08
PPME1-202ENST00000398427 NLRP6P59044 892 aa15.54■□□□□ 0.08
PPME1-202ENST00000398427 MED1Q15648 1581 aaPredicted RBP15.54■□□□□ 0.08
PPME1-202ENST00000398427 LRRC59Q96AG4 307 aaKnown RBP15.54■□□□□ 0.08
PPME1-202ENST00000398427 HSPA1LP34931 641 aa15.53■□□□□ 0.08
PPME1-202ENST00000398427 COG3Q96JB2 828 aa15.53■□□□□ 0.08
PPME1-202ENST00000398427 PHRF1Q9P1Y6 1649 aaKnown RBP15.53■□□□□ 0.08
PPME1-202ENST00000398427 PARD3Q8TEW0 1356 aa15.52■□□□□ 0.08
PPME1-202ENST00000398427 ABCA3Q99758 1704 aa15.52■□□□□ 0.08
PPME1-202ENST00000398427 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
PPME1-202ENST00000398427 SLIT3O75094 1523 aa15.52■□□□□ 0.07
PPME1-202ENST00000398427 NLRP13Q86W25 1043 aa15.52■□□□□ 0.07
PPME1-202ENST00000398427 USP19O94966 1318 aa15.52■□□□□ 0.07
PPME1-202ENST00000398427 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.07
PPME1-202ENST00000398427 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
PPME1-202ENST00000398427 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
PPME1-202ENST00000398427 MORC1Q86VD1 984 aa15.51■□□□□ 0.07
PPME1-202ENST00000398427 MIER1Q8N108 512 aa15.51■□□□□ 0.07
PPME1-202ENST00000398427 SHPRHQ149N8 1683 aa15.5■□□□□ 0.07
PPME1-202ENST00000398427 TNNT2P45379 298 aaPredicted RBP15.5■□□□□ 0.07
PPME1-202ENST00000398427 CABLES1Q8TDN4 633 aa15.5■□□□□ 0.07
PPME1-202ENST00000398427 FBXO41Q8TF61 875 aa15.5■□□□□ 0.07
PPME1-202ENST00000398427 NFAT5O94916 1531 aa15.49■□□□□ 0.07
PPME1-202ENST00000398427 ANP32CO43423 234 aa15.49■□□□□ 0.07
PPME1-202ENST00000398427 FBLN1P23142 703 aa15.49■□□□□ 0.07
PPME1-202ENST00000398427 SOX12O15370 315 aa15.48■□□□□ 0.07
PPME1-202ENST00000398427 RALBP1Q15311 655 aa15.48■□□□□ 0.07
PPME1-202ENST00000398427 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
PPME1-202ENST00000398427 JCADQ9P266 1359 aa15.47■□□□□ 0.07
PPME1-202ENST00000398427 GCP02774 474 aa15.46■□□□□ 0.07
PPME1-202ENST00000398427 LTN1O94822 1766 aa15.46■□□□□ 0.07
PPME1-202ENST00000398427 AATKQ6ZMQ8 1374 aa15.45■□□□□ 0.06
PPME1-202ENST00000398427 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
PPME1-202ENST00000398427 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
PPME1-202ENST00000398427 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
PPME1-202ENST00000398427 MYBBP1AQ9BQG0 1328 aaKnown RBP15.44■□□□□ 0.06
PPME1-202ENST00000398427 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
PPME1-202ENST00000398427 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
PPME1-202ENST00000398427 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
PPME1-202ENST00000398427 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
PPME1-202ENST00000398427 MAP3K19Q56UN5 1328 aa15.42■□□□□ 0.06
PPME1-202ENST00000398427 ZC3H6P61129 1189 aaKnown RBP15.42■□□□□ 0.06
PPME1-202ENST00000398427 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
PPME1-202ENST00000398427 ARHGEF25Q86VW2 580 aa15.41■□□□□ 0.06
PPME1-202ENST00000398427 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
PPME1-202ENST00000398427 MTHFSP49914 203 aa15.4■□□□□ 0.06
PPME1-202ENST00000398427 CPDO75976 1380 aa15.4■□□□□ 0.06
PPME1-202ENST00000398427 LRP6O75581 1613 aa15.4■□□□□ 0.06
PPME1-202ENST00000398427 COL18A1P39060 1754 aa15.39■□□□□ 0.05
PPME1-202ENST00000398427 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
PPME1-202ENST00000398427 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
PPME1-202ENST00000398427 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
PPME1-202ENST00000398427 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms