RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 SSH2Q76I76 1423 aa19.44■□□□□ 0.7
UBASH3A-203ENST00000398367 NGDNQ8NEJ9 315 aaKnown RBP19.44■□□□□ 0.7
UBASH3A-203ENST00000398367 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
UBASH3A-203ENST00000398367 HSPA2P54652 639 aa19.42■□□□□ 0.7
UBASH3A-203ENST00000398367 NGEFQ8N5V2 710 aa19.42■□□□□ 0.7
UBASH3A-203ENST00000398367 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
UBASH3A-203ENST00000398367 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
UBASH3A-203ENST00000398367 NUDCQ9Y266 331 aa19.42■□□□□ 0.7
UBASH3A-203ENST00000398367 COL3A1P02461 1466 aaPredicted RBP19.41■□□□□ 0.7
UBASH3A-203ENST00000398367 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
UBASH3A-203ENST00000398367 C14orf37Q86TY3 774 aa19.41■□□□□ 0.7
UBASH3A-203ENST00000398367 PMFBP1Q8TBY8 1022 aa19.41■□□□□ 0.7
UBASH3A-203ENST00000398367 OVOS2A0A0J9YW53 1432 aa19.4■□□□□ 0.7
UBASH3A-203ENST00000398367 OVOS2Q6IE36 1432 aa19.4■□□□□ 0.7
UBASH3A-203ENST00000398367 POLKQ9UBT6 870 aa19.39■□□□□ 0.69
UBASH3A-203ENST00000398367 PHF8Q9UPP1 1060 aa19.38■□□□□ 0.69
UBASH3A-203ENST00000398367 NEFLP07196 543 aa19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 RBM33Q96EV2 1170 aaKnown RBP19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
UBASH3A-203ENST00000398367 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
UBASH3A-203ENST00000398367 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
UBASH3A-203ENST00000398367 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
UBASH3A-203ENST00000398367 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
UBASH3A-203ENST00000398367 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
UBASH3A-203ENST00000398367 DCCP43146 1447 aa19.35■□□□□ 0.69
UBASH3A-203ENST00000398367 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
UBASH3A-203ENST00000398367 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
UBASH3A-203ENST00000398367 RGPD8O14715 1765 aaPredicted RBP19.34■□□□□ 0.69
UBASH3A-203ENST00000398367 APAF1O14727 1248 aa19.33■□□□□ 0.68
UBASH3A-203ENST00000398367 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
UBASH3A-203ENST00000398367 TMEM94Q12767 1356 aa19.33■□□□□ 0.68
UBASH3A-203ENST00000398367 ZNF521Q96K83 1311 aa19.32■□□□□ 0.68
UBASH3A-203ENST00000398367 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
UBASH3A-203ENST00000398367 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
UBASH3A-203ENST00000398367 SUPT16HQ9Y5B9 1047 aaKnown RBP19.32■□□□□ 0.68
UBASH3A-203ENST00000398367 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
UBASH3A-203ENST00000398367 LRRC7Q96NW7 1537 aa19.31■□□□□ 0.68
UBASH3A-203ENST00000398367 IQSEC2Q5JU85 1478 aa19.31■□□□□ 0.68
UBASH3A-203ENST00000398367 U2SURPO15042 1029 aaKnown RBP19.31■□□□□ 0.68
UBASH3A-203ENST00000398367 PPM1GO15355 546 aaPredicted RBP19.31■□□□□ 0.68
UBASH3A-203ENST00000398367 STRCQ7RTU9 1775 aa19.3■□□□□ 0.68
UBASH3A-203ENST00000398367 PIK3C2AO00443 1686 aa19.29■□□□□ 0.68
UBASH3A-203ENST00000398367 ATF3P18847 181 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 FBLN1P23142 703 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 USP54Q70EL1 1684 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 STRCP1A6NGW2 1772 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
UBASH3A-203ENST00000398367 PSME1Q06323 249 aa19.27■□□□□ 0.68
UBASH3A-203ENST00000398367 KIF1AQ12756 1690 aa19.26■□□□□ 0.67
UBASH3A-203ENST00000398367 FKBP8Q14318 412 aa19.26■□□□□ 0.67
UBASH3A-203ENST00000398367 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
UBASH3A-203ENST00000398367 FCHSD2O94868 740 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 IL13P35225 146 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 NLRP6P59044 892 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 CADPS2Q86UW7 1296 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 CDCA7LQ96GN5 454 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 MSH6P52701 1360 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 MAP2P11137 1827 aaKnown RBP19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 ABTB2Q8N961 1025 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
UBASH3A-203ENST00000398367 MST1RQ04912 1400 aa19.24■□□□□ 0.67
UBASH3A-203ENST00000398367 ORAI2Q96SN7 254 aa19.24■□□□□ 0.67
UBASH3A-203ENST00000398367 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
UBASH3A-203ENST00000398367 KIF24Q5T7B8 1368 aa19.24■□□□□ 0.67
UBASH3A-203ENST00000398367 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
UBASH3A-203ENST00000398367 SBNO1A3KN83 1393 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 WWC1Q8IX03 1113 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 E9PSI1 815 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
UBASH3A-203ENST00000398367 FLT4P35916 1363 aa19.21■□□□□ 0.67
UBASH3A-203ENST00000398367 NEFMP07197 916 aa19.21■□□□□ 0.67
UBASH3A-203ENST00000398367 MAP3K19Q56UN5 1328 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 FOXO3O43524 673 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 TRMT2AQ8IZ69 625 aaKnown RBP19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 RCAN3Q9UKA8 241 aa19.2■□□□□ 0.66
UBASH3A-203ENST00000398367 ZNF335Q9H4Z2 1342 aaPredicted RBP19.18■□□□□ 0.66
UBASH3A-203ENST00000398367 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
UBASH3A-203ENST00000398367 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
UBASH3A-203ENST00000398367 SOX12O15370 315 aa19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 EIF4A2Q14240 407 aaKnown RBP19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 RTL1A6NKG5 1358 aa19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 TMPOP42166 694 aaKnown RBP19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 AMPHP49418 695 aa19.17■□□□□ 0.66
UBASH3A-203ENST00000398367 NUTM2GQ5VZR2 741 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms