RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
RGPD2-201ENST00000398146 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
RGPD2-201ENST00000398146 CCDC181Q5TID7 509 aa13.46□□□□□ -0.25
RGPD2-201ENST00000398146 REC8O95072 547 aa13.46□□□□□ -0.26
RGPD2-201ENST00000398146 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.26
RGPD2-201ENST00000398146 CCDC69A6NI79 296 aa13.46□□□□□ -0.26
RGPD2-201ENST00000398146 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.26
RGPD2-201ENST00000398146 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
RGPD2-201ENST00000398146 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
RGPD2-201ENST00000398146 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
RGPD2-201ENST00000398146 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
RGPD2-201ENST00000398146 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.26
RGPD2-201ENST00000398146 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
RGPD2-201ENST00000398146 ZNF771Q7L3S4 317 aaPredicted RBP13.44□□□□□ -0.26
RGPD2-201ENST00000398146 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 MNS1Q8NEH6 495 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 ANAPC15P60006 121 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 CBX1P83916 185 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
RGPD2-201ENST00000398146 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
RGPD2-201ENST00000398146 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 TNIP1Q15025 636 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
RGPD2-201ENST00000398146 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 SPG7Q9UQ90 795 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 ZC3H6P61129 1189 aaKnown RBP13.42□□□□□ -0.26
RGPD2-201ENST00000398146 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 TDO2P48775 406 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
RGPD2-201ENST00000398146 SMC2O95347 1197 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 MAP4K4O95819 1239 aaPredicted RBP13.41□□□□□ -0.26
RGPD2-201ENST00000398146 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
RGPD2-201ENST00000398146 TAX1BP1Q86VP1 789 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 ST20-MTHFSA0A0A6YYL1 179 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 MTHFSP49914 203 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 STK3Q13188 491 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
RGPD2-201ENST00000398146 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
RGPD2-201ENST00000398146 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
RGPD2-201ENST00000398146 ZNF354CQ86Y25 554 aa13.4□□□□□ -0.26
RGPD2-201ENST00000398146 MRPS9P82933 396 aaKnown RBP13.4□□□□□ -0.26
RGPD2-201ENST00000398146 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
RGPD2-201ENST00000398146 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
RGPD2-201ENST00000398146 APAF1O14727 1248 aa13.4□□□□□ -0.26
RGPD2-201ENST00000398146 EP400NLQ6ZTU2 488 aa13.39□□□□□ -0.27
RGPD2-201ENST00000398146 FILIP1LQ4L180 1135 aa13.39□□□□□ -0.27
RGPD2-201ENST00000398146 FEZ1Q99689 392 aa13.39□□□□□ -0.27
RGPD2-201ENST00000398146 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
RGPD2-201ENST00000398146 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
RGPD2-201ENST00000398146 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
RGPD2-201ENST00000398146 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 L3MBTL2Q969R5 705 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 BEGAINQ9BUH8 593 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 PTPRGP23470 1445 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 ERLIN2O94905 339 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 PSMA5P28066 241 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 GBP2P32456 591 aaPredicted RBP13.38□□□□□ -0.27
RGPD2-201ENST00000398146 TEX35Q5T0J7 233 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 PABPN1LA6NDY0 278 aaKnown RBP13.38□□□□□ -0.27
RGPD2-201ENST00000398146 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
RGPD2-201ENST00000398146 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
RGPD2-201ENST00000398146 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
RGPD2-201ENST00000398146 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
RGPD2-201ENST00000398146 CLASRPQ8N2M8 674 aaKnown RBP13.37□□□□□ -0.27
RGPD2-201ENST00000398146 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
RGPD2-201ENST00000398146 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
RGPD2-201ENST00000398146 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
RGPD2-201ENST00000398146 GNAI1P63096 354 aa13.37□□□□□ -0.27
RGPD2-201ENST00000398146 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
RGPD2-201ENST00000398146 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 CCDC112Q8NEF3 446 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
RGPD2-201ENST00000398146 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
RGPD2-201ENST00000398146 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
RGPD2-201ENST00000398146 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
RGPD2-201ENST00000398146 TRIM22Q8IYM9 498 aa13.35□□□□□ -0.27
RGPD2-201ENST00000398146 DZIP1LQ8IYY4 767 aaKnown RBP13.35□□□□□ -0.27
RGPD2-201ENST00000398146 BMP2KQ9NSY1 1161 aaPredicted RBP13.35□□□□□ -0.27
RGPD2-201ENST00000398146 UBAC1Q9BSL1 405 aa13.35□□□□□ -0.27
RGPD2-201ENST00000398146 DHX8Q14562 1220 aaKnown RBP13.35□□□□□ -0.27
RGPD2-201ENST00000398146 ZNHIT6Q9NWK9 470 aaKnown RBP13.35□□□□□ -0.27
RGPD2-201ENST00000398146 H0YHG0 523 aa13.34□□□□□ -0.27
RGPD2-201ENST00000398146 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
RGPD2-201ENST00000398146 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
RGPD2-201ENST00000398146 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms