RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SOX11P35716 441 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 MARSP56192 900 aaKnown RBP3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 ZNF326Q5BKZ1 582 aaKnown RBP3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 DNAJC14Q6Y2X3 702 aaPredicted RBP3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 TBC1D9Q6ZT07 1266 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 PNMA1Q8ND90 353 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 PRR7Q8TB68 274 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 CERKQ8TCT0 537 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 ZBTB3Q9H5J0 574 aa3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 HMX1Q9NP08 348 aaPredicted RBP3.14□□□□□ -1.91
HMGN2P39-201ENST00000398005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 ATP9BO43861 1147 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 GJA5P36382 358 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 CTDSPL2Q05D32 466 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 FAM98CQ17RN3 349 aaKnown RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 TMEM164Q5U3C3 297 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 PRPF38BQ5VTL8 546 aaKnown RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 HELBQ8NG08 1087 aaPredicted RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 STK32AQ8WU08 396 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 TSR3Q9UJK0 312 aaKnown RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 TSKSQ9UJT2 592 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 NOVA2Q9UNW9 492 aaKnown RBP3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 HPS5Q9UPZ3 1129 aa3.13□□□□□ -1.91
HMGN2P39-201ENST00000398005 ANKRD33BA6NCL7 494 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 RCCD1A6NED2 376 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 SOWAHDA6NJG2 315 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 C3orf80F5H4A9 247 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 EIF4G2P78344 907 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 ELOAQ14241 798 aaKnown RBP3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 TJAP1Q5JTD0 557 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 RDH13Q8NBN7 331 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 LRCH3Q96II8 777 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 SPATA32Q96LK8 384 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 C8orf37Q96NL8 207 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 TRIM34Q9BYJ4 488 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 BCL11AQ9H165 835 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 ZMIZ1Q9ULJ6 1067 aa3.12□□□□□ -1.91
HMGN2P39-201ENST00000398005 GFRA3O60609 400 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 GPR37L1O60883 481 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 NCLP19338 710 aaKnown RBP3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 SERPINB4P48594 390 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 ZC3H6P61129 1189 aaKnown RBP3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 LAPTM4AQ15012 233 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 SF3A1Q15459 793 aaKnown RBP3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 KANK4Q5T7N3 995 aaPredicted RBP3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 PHLDB3Q6NSJ2 640 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 TRAF7Q6Q0C0 670 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 TTC13Q8NBP0 860 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 LRRN4Q8WUT4 740 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 UBXN4Q92575 508 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 RBM27Q9P2N5 1060 aaKnown RBP3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 FAM198AQ9UFP1 575 aa3.11□□□□□ -1.91
HMGN2P39-201ENST00000398005 SMAPO00193 183 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 KDM4AO75164 1064 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 FDX1P10109 184 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 SSFA2P28290 1259 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 PRSS12P56730 875 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 PPP4CP60510 307 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 NAALADL2Q58DX5 795 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 NOM1Q5C9Z4 860 aaKnown RBP3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 PPP1R18Q6NYC8 613 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 SAMD7Q7Z3H4 446 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 EPS8L1Q8TE68 723 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 CDCA7LQ96GN5 454 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 PRKD2Q9BZL6 878 aa3.1□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L3A6NCW0 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L4A6NCW7 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L15C9J2P7 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L10C9JJH3 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L13C9JLJ4 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L12C9JPN9 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L11C9JVI0 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L21D6R901 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L18D6R9N7 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L22D6RA61 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L17D6RBQ6 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L19D6RCP7 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L20D6RJB6 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 SKIP12755 728 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 ATP2B4P23634 1241 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L24Q0WX57 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 MTMR2Q13614 643 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 NR6A1Q15406 480 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 TSNAXIP1Q2TAA8 658 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 LARP1Q6PKG0 1096 aaKnown RBP3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L2Q6R6M4 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 USP17L1Q7RTZ2 530 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 PACS2Q86VP3 889 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 NPAS4Q8IUM7 802 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 ANKRD13AQ8IZ07 590 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 FAM200AQ8TCP9 573 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 ZNF516Q92618 1163 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 MTRQ99707 1265 aa3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 CWC22Q9HCG8 908 aaKnown RBP3.09□□□□□ -1.91
HMGN2P39-201ENST00000398005 ANKRD62A6NC57 917 aa3.08□□□□□ -1.92
HMGN2P39-201ENST00000398005 FAM196BA6NMK8 535 aa3.08□□□□□ -1.92
HMGN2P39-201ENST00000398005 USP17L5A8MUK1 530 aa3.08□□□□□ -1.92
HMGN2P39-201ENST00000398005 CFAP99D6REC4 459 aa3.08□□□□□ -1.92
HMGN2P39-201ENST00000398005 C6orf229H3BNL8 230 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms