RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0.01
SOCS6-201ENST00000397942 PRPF40AO75400 957 aaKnown RBP15.08■□□□□ 0.01
SOCS6-201ENST00000397942 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0
SOCS6-201ENST00000397942 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0
SOCS6-201ENST00000397942 TESK2Q96S53 571 aa15.08■□□□□ 0
SOCS6-201ENST00000397942 TPM4P67936 248 aa15.08■□□□□ 0
SOCS6-201ENST00000397942 WAPLQ7Z5K2 1190 aa15.08■□□□□ 0
SOCS6-201ENST00000397942 BICD2Q8TD16 824 aa15.08■□□□□ 0
SOCS6-201ENST00000397942 DISP3Q9P2K9 1392 aa15.08■□□□□ 0
SOCS6-201ENST00000397942 GRIN2AQ12879 1464 aa15.07■□□□□ 0
SOCS6-201ENST00000397942 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
SOCS6-201ENST00000397942 RPAP2Q8IXW5 612 aaPredicted RBP15.07■□□□□ 0
SOCS6-201ENST00000397942 CHMP4CQ96CF2 233 aa15.07■□□□□ 0
SOCS6-201ENST00000397942 MBD3O95983 291 aa15.07■□□□□ 0
SOCS6-201ENST00000397942 MCM2P49736 904 aa15.07■□□□□ 0
SOCS6-201ENST00000397942 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
SOCS6-201ENST00000397942 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
SOCS6-201ENST00000397942 PER1O15534 1290 aaPredicted RBP15.06■□□□□ 0
SOCS6-201ENST00000397942 TRIM27P14373 513 aa15.06■□□□□ 0
SOCS6-201ENST00000397942 DCTN1Q14203 1278 aa15.06■□□□□ 0
SOCS6-201ENST00000397942 CPLX1O14810 134 aa15.05■□□□□ 0
SOCS6-201ENST00000397942 K7ELQ4 463 aaPredicted RBP15.05■□□□□ 0
SOCS6-201ENST00000397942 IGHDP01880 384 aa15.05■□□□□ -0
SOCS6-201ENST00000397942 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
SOCS6-201ENST00000397942 LRRFIP1Q32MZ4 808 aaKnown RBP15.05■□□□□ -0
SOCS6-201ENST00000397942 CIZ1Q9ULV3 898 aaPredicted RBP15.05■□□□□ -0
SOCS6-201ENST00000397942 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
SOCS6-201ENST00000397942 NUDT16Q96DE0 195 aaKnown RBP15.04■□□□□ -0
SOCS6-201ENST00000397942 NEUROD6Q96NK8 337 aa15.04■□□□□ -0
SOCS6-201ENST00000397942 NKTRP30414 1462 aaKnown RBP15.04■□□□□ -0
SOCS6-201ENST00000397942 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
SOCS6-201ENST00000397942 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 CUL7Q14999 1698 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 SRCIN1Q9C0H9 1055 aa15.03■□□□□ -0
SOCS6-201ENST00000397942 PCDHB15Q9Y5E8 787 aa15.02■□□□□ -0
SOCS6-201ENST00000397942 EMILIN1Q9Y6C2 1016 aa15.02■□□□□ -0
SOCS6-201ENST00000397942 APPP05067 770 aa15.02□□□□□ -0.01
SOCS6-201ENST00000397942 IL1RAPL2Q9NP60 686 aa15.02□□□□□ -0.01
SOCS6-201ENST00000397942 CNTROBQ8N137 903 aa15.02□□□□□ -0.01
SOCS6-201ENST00000397942 LRRCC1Q9C099 1032 aa15.02□□□□□ -0.01
SOCS6-201ENST00000397942 THOC2Q8NI27 1593 aaKnown RBP15.02□□□□□ -0.01
SOCS6-201ENST00000397942 FIBPO43427 364 aa15.01□□□□□ -0.01
SOCS6-201ENST00000397942 C14orf93Q9H972 538 aaKnown RBP15.01□□□□□ -0.01
SOCS6-201ENST00000397942 RASSF8Q8NHQ8 419 aa15.01□□□□□ -0.01
SOCS6-201ENST00000397942 FSD1Q9BTV5 496 aa15.01□□□□□ -0.01
SOCS6-201ENST00000397942 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
SOCS6-201ENST00000397942 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
SOCS6-201ENST00000397942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
SOCS6-201ENST00000397942 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
SOCS6-201ENST00000397942 MCM10Q7L590 875 aa15□□□□□ -0.01
SOCS6-201ENST00000397942 NME9Q86XW9 330 aa15□□□□□ -0.01
SOCS6-201ENST00000397942 TRDNQ13061 729 aa15□□□□□ -0.01
SOCS6-201ENST00000397942 PDZRN4Q6ZMN7 1036 aaPredicted RBP15□□□□□ -0.01
SOCS6-201ENST00000397942 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
SOCS6-201ENST00000397942 SRGAP3O43295 1099 aa15□□□□□ -0.01
SOCS6-201ENST00000397942 PDCP20941 246 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 EVA1CP58658 441 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 GRPEL1Q9HAV7 217 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 CCDC27Q2M243 656 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
SOCS6-201ENST00000397942 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
SOCS6-201ENST00000397942 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
SOCS6-201ENST00000397942 ZNF530Q6P9A1 599 aaPredicted RBP14.99□□□□□ -0.01
SOCS6-201ENST00000397942 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
SOCS6-201ENST00000397942 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
SOCS6-201ENST00000397942 ESPNB1AK53 854 aa14.98□□□□□ -0.01
SOCS6-201ENST00000397942 SCAF11Q99590 1463 aaKnown RBP14.98□□□□□ -0.01
SOCS6-201ENST00000397942 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
SOCS6-201ENST00000397942 FBLN1P23142 703 aa14.98□□□□□ -0.01
SOCS6-201ENST00000397942 SDF4Q9BRK5 362 aa14.98□□□□□ -0.01
SOCS6-201ENST00000397942 CCDC73Q6ZRK6 1079 aa14.98□□□□□ -0.01
SOCS6-201ENST00000397942 THEMISQ8N1K5 641 aaPredicted RBP14.98□□□□□ -0.01
SOCS6-201ENST00000397942 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
SOCS6-201ENST00000397942 SASS6Q6UVJ0 657 aa14.97□□□□□ -0.01
SOCS6-201ENST00000397942 SYNE3Q6ZMZ3 975 aa14.97□□□□□ -0.01
SOCS6-201ENST00000397942 ZNF592Q92610 1267 aa14.97□□□□□ -0.01
SOCS6-201ENST00000397942 PSMA5P28066 241 aa14.96□□□□□ -0.01
SOCS6-201ENST00000397942 AKAP17AQ02040 695 aaKnown RBP14.96□□□□□ -0.01
SOCS6-201ENST00000397942 GPRASP1Q5JY77 1395 aa14.96□□□□□ -0.01
SOCS6-201ENST00000397942 MPNDQ8N594 471 aa14.96□□□□□ -0.01
SOCS6-201ENST00000397942 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.01
SOCS6-201ENST00000397942 RALYLQ86SE5 291 aaKnown RBP14.96□□□□□ -0.02
SOCS6-201ENST00000397942 ATP10BO94823 1461 aa14.95□□□□□ -0.02
SOCS6-201ENST00000397942 DHX29Q7Z478 1369 aaKnown RBP14.95□□□□□ -0.02
SOCS6-201ENST00000397942 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
SOCS6-201ENST00000397942 NUP153P49790 1475 aaKnown RBP14.95□□□□□ -0.02
SOCS6-201ENST00000397942 WASHC4Q2M389 1173 aa14.95□□□□□ -0.02
SOCS6-201ENST00000397942 FOSBP53539 338 aa14.95□□□□□ -0.02
SOCS6-201ENST00000397942 IFT57Q9NWB7 429 aa14.95□□□□□ -0.02
SOCS6-201ENST00000397942 TBC1D32Q96NH3 1257 aa14.94□□□□□ -0.02
SOCS6-201ENST00000397942 F6X3S4 739 aa14.94□□□□□ -0.02
SOCS6-201ENST00000397942 FYB1O15117 783 aa14.94□□□□□ -0.02
SOCS6-201ENST00000397942 WDR33Q9C0J8 1336 aaKnown RBP14.93□□□□□ -0.02
SOCS6-201ENST00000397942 SMARCA5O60264 1052 aaPredicted RBP14.93□□□□□ -0.02
SOCS6-201ENST00000397942 TRIM29Q14134 588 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms