RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.3
CPSF1P1-201ENST00000397477 MYOM2P54296 1465 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 PPRC1Q5VV67 1664 aaKnown RBP13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 CEP152O94986 1710 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
CPSF1P1-201ENST00000397477 INO80Q9ULG1 1556 aaPredicted RBP13.19□□□□□ -0.3
CPSF1P1-201ENST00000397477 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
CPSF1P1-201ENST00000397477 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
CPSF1P1-201ENST00000397477 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
CPSF1P1-201ENST00000397477 KIF1BO60333 1816 aa13.19□□□□□ -0.3
CPSF1P1-201ENST00000397477 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 ARAP3Q8WWN8 1544 aa13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
CPSF1P1-201ENST00000397477 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
CPSF1P1-201ENST00000397477 ABCC3O15438 1527 aa13.17□□□□□ -0.3
CPSF1P1-201ENST00000397477 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
CPSF1P1-201ENST00000397477 TSPYL6Q8N831 410 aa13.17□□□□□ -0.3
CPSF1P1-201ENST00000397477 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 INSRP06213 1382 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 FCHSD2O94868 740 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 AMPHP49418 695 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 MCM10Q7L590 875 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
CPSF1P1-201ENST00000397477 LAMC1P11047 1609 aa13.15□□□□□ -0.3
CPSF1P1-201ENST00000397477 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
CPSF1P1-201ENST00000397477 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
CPSF1P1-201ENST00000397477 IQGAP1P46940 1657 aa13.15□□□□□ -0.3
CPSF1P1-201ENST00000397477 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
CPSF1P1-201ENST00000397477 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
CPSF1P1-201ENST00000397477 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPSF1P1-201ENST00000397477 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
CPSF1P1-201ENST00000397477 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
CPSF1P1-201ENST00000397477 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
CPSF1P1-201ENST00000397477 GNAI1P63096 354 aa13.13□□□□□ -0.31
CPSF1P1-201ENST00000397477 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
CPSF1P1-201ENST00000397477 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 MROH1Q8NDA8 1641 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 NSD2O96028 1365 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 HSP90AB2PQ58FF8 381 aa13.12□□□□□ -0.31
CPSF1P1-201ENST00000397477 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
CPSF1P1-201ENST00000397477 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
CPSF1P1-201ENST00000397477 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
CPSF1P1-201ENST00000397477 GSE1Q14687 1217 aa13.11□□□□□ -0.31
CPSF1P1-201ENST00000397477 C8orf58Q8NAV2 365 aa13.11□□□□□ -0.31
CPSF1P1-201ENST00000397477 NEO1Q92859 1461 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 NLRP6P59044 892 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 VWDEQ8N2E2 1590 aa13.1□□□□□ -0.31
CPSF1P1-201ENST00000397477 METP08581 1390 aa13.09□□□□□ -0.31
CPSF1P1-201ENST00000397477 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
CPSF1P1-201ENST00000397477 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
CPSF1P1-201ENST00000397477 USP35Q9P2H5 1018 aa13.09□□□□□ -0.31
CPSF1P1-201ENST00000397477 TSPOAP1O95153 1857 aa13.09□□□□□ -0.31
CPSF1P1-201ENST00000397477 FRMPD1Q5SYB0 1578 aa13.08□□□□□ -0.31
CPSF1P1-201ENST00000397477 ACEP12821 1306 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 DEPDC5O75140 1603 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 ZMYM3Q14202 1370 aa13.08□□□□□ -0.32
CPSF1P1-201ENST00000397477 GLI2P10070 1586 aa13.07□□□□□ -0.32
CPSF1P1-201ENST00000397477 FOXO3O43524 673 aa13.07□□□□□ -0.32
CPSF1P1-201ENST00000397477 TSPYL4Q9UJ04 414 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 AMOTL2Q9Y2J4 779 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 TPRNQ4KMQ1 711 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 VAMP4O75379 141 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
CPSF1P1-201ENST00000397477 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 CT47B1P0C2W7 299 aaPredicted RBP13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 F6X3S4 739 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 LTKP29376 864 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 IL13P35225 146 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 EIF4A2Q14240 407 aaKnown RBP13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 LMTK2Q8IWU2 1503 aa13.05□□□□□ -0.32
CPSF1P1-201ENST00000397477 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 MYOM1P52179 1685 aa13.04□□□□□ -0.32
CPSF1P1-201ENST00000397477 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms