RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ANKRD26Q9UPS8 1709 aa32.01■■■□□ 2.71
TSPAN4-202ENST00000397396 BRINP3Q76B58 766 aa32■■■□□ 2.71
TSPAN4-202ENST00000397396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32■■■□□ 2.71
TSPAN4-202ENST00000397396 MIER1Q8N108 512 aa32■■■□□ 2.71
TSPAN4-202ENST00000397396 TOM1O60784 492 aa32■■■□□ 2.71
TSPAN4-202ENST00000397396 FYB1O15117 783 aa31.99■■■□□ 2.71
TSPAN4-202ENST00000397396 FOXO3O43524 673 aa31.99■■■□□ 2.71
TSPAN4-202ENST00000397396 MORC1Q86VD1 984 aa31.97■■■□□ 2.71
TSPAN4-202ENST00000397396 MYBBP1AQ9BQG0 1328 aaKnown RBP31.96■■■□□ 2.71
TSPAN4-202ENST00000397396 CNGB1Q14028 1251 aaPredicted RBP31.96■■■□□ 2.71
TSPAN4-202ENST00000397396 CCER2I3L3R5 266 aa31.94■■■□□ 2.7
TSPAN4-202ENST00000397396 KRT28Q7Z3Y7 464 aa31.94■■■□□ 2.7
TSPAN4-202ENST00000397396 CERKQ8TCT0 537 aa31.94■■■□□ 2.7
TSPAN4-202ENST00000397396 COG3Q96JB2 828 aa31.93■■■□□ 2.7
TSPAN4-202ENST00000397396 GGNBP2Q9H3C7 697 aa31.93■■■□□ 2.7
TSPAN4-202ENST00000397396 SBNO1A3KN83 1393 aa31.93■■■□□ 2.7
TSPAN4-202ENST00000397396 USP31Q70CQ4 1352 aa31.92■■■□□ 2.7
TSPAN4-202ENST00000397396 PAK3O75914 559 aaPredicted RBP31.91■■■□□ 2.7
TSPAN4-202ENST00000397396 NME9Q86XW9 330 aa31.91■■■□□ 2.7
TSPAN4-202ENST00000397396 TRPM3Q9HCF6 1732 aaPredicted RBP31.91■■■□□ 2.7
TSPAN4-202ENST00000397396 OVOS2A0A0J9YW53 1432 aa31.9■■■□□ 2.7
TSPAN4-202ENST00000397396 NHSL1Q5SYE7 1610 aa31.9■■■□□ 2.7
TSPAN4-202ENST00000397396 OVOS2Q6IE36 1432 aa31.9■■■□□ 2.7
TSPAN4-202ENST00000397396 USP54Q70EL1 1684 aa31.9■■■□□ 2.7
TSPAN4-202ENST00000397396 SCAF1Q9H7N4 1312 aaKnown RBP31.9■■■□□ 2.7
TSPAN4-202ENST00000397396 PXDNQ92626 1479 aa31.89■■■□□ 2.7
TSPAN4-202ENST00000397396 PIK3C2AO00443 1686 aa31.88■■■□□ 2.69
TSPAN4-202ENST00000397396 ROBO1Q9Y6N7 1651 aa31.88■■■□□ 2.69
TSPAN4-202ENST00000397396 NLRP13Q86W25 1043 aa31.87■■■□□ 2.69
TSPAN4-202ENST00000397396 ABTB2Q8N961 1025 aa31.86■■■□□ 2.69
TSPAN4-202ENST00000397396 AHDC1Q5TGY3 1603 aaPredicted RBP31.85■■■□□ 2.69
TSPAN4-202ENST00000397396 SOS2Q07890 1332 aaPredicted RBP31.84■■■□□ 2.69
TSPAN4-202ENST00000397396 UBAP1LF5GYI3 381 aa31.84■■■□□ 2.69
TSPAN4-202ENST00000397396 TNS3Q68CZ2 1445 aa31.84■■■□□ 2.69
TSPAN4-202ENST00000397396 ARHGEF10O15013 1369 aa31.83■■■□□ 2.69
TSPAN4-202ENST00000397396 PPP2R1AP30153 589 aa31.82■■■□□ 2.68
TSPAN4-202ENST00000397396 NLRP6P59044 892 aa31.82■■■□□ 2.68
TSPAN4-202ENST00000397396 XPCQ01831 940 aaPredicted RBP31.82■■■□□ 2.68
TSPAN4-202ENST00000397396 ALS2Q96Q42 1657 aa31.82■■■□□ 2.68
TSPAN4-202ENST00000397396 AATKQ6ZMQ8 1374 aa31.81■■■□□ 2.68
TSPAN4-202ENST00000397396 SPATA31A3Q5VYP0 1347 aa31.79■■■□□ 2.68
TSPAN4-202ENST00000397396 DDX17Q92841 729 aaKnown RBP31.77■■■□□ 2.68
TSPAN4-202ENST00000397396 ZRANB1Q9UGI0 708 aa31.76■■■□□ 2.68
TSPAN4-202ENST00000397396 TNNT2P45379 298 aaPredicted RBP31.75■■■□□ 2.67
TSPAN4-202ENST00000397396 LMOD2Q6P5Q4 547 aa31.75■■■□□ 2.67
TSPAN4-202ENST00000397396 KCNH5Q8NCM2 988 aa31.75■■■□□ 2.67
TSPAN4-202ENST00000397396 MRS2Q9HD23 443 aa31.74■■■□□ 2.67
TSPAN4-202ENST00000397396 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
TSPAN4-202ENST00000397396 USP19O94966 1318 aa31.72■■■□□ 2.67
TSPAN4-202ENST00000397396 MARF1Q9Y4F3 1742 aaKnown RBP31.72■■■□□ 2.67
TSPAN4-202ENST00000397396 PIP4K2BP78356 416 aa31.72■■■□□ 2.67
TSPAN4-202ENST00000397396 SLIT3O75094 1523 aa31.71■■■□□ 2.67
TSPAN4-202ENST00000397396 SMG6Q86US8 1419 aaKnown RBP31.71■■■□□ 2.67
TSPAN4-202ENST00000397396 CFAP53Q96M91 514 aa31.71■■■□□ 2.67
TSPAN4-202ENST00000397396 NUTM2GQ5VZR2 741 aa31.7■■■□□ 2.66
TSPAN4-202ENST00000397396 LRRC59Q96AG4 307 aaKnown RBP31.7■■■□□ 2.66
TSPAN4-202ENST00000397396 PHLPP1O60346 1717 aa31.68■■■□□ 2.66
TSPAN4-202ENST00000397396 KIF24Q5T7B8 1368 aa31.67■■■□□ 2.66
TSPAN4-202ENST00000397396 MTHFSP49914 203 aa31.66■■■□□ 2.66
TSPAN4-202ENST00000397396 CDK12Q9NYV4 1490 aaPredicted RBP31.64■■■□□ 2.66
TSPAN4-202ENST00000397396 POLKQ9UBT6 870 aa31.64■■■□□ 2.66
TSPAN4-202ENST00000397396 COL16A1Q07092 1604 aaPredicted RBP31.63■■■□□ 2.65
TSPAN4-202ENST00000397396 NFAT5O94916 1531 aa31.63■■■□□ 2.65
TSPAN4-202ENST00000397396 MAP2P11137 1827 aaKnown RBP31.62■■■□□ 2.65
TSPAN4-202ENST00000397396 PHRF1Q9P1Y6 1649 aaKnown RBP31.61■■■□□ 2.65
TSPAN4-202ENST00000397396 GCP02774 474 aa31.61■■■□□ 2.65
TSPAN4-202ENST00000397396 RTL1A6NKG5 1358 aa31.6■■■□□ 2.65
TSPAN4-202ENST00000397396 INSRP06213 1382 aa31.6■■■□□ 2.65
TSPAN4-202ENST00000397396 CCDC184Q52MB2 194 aa31.59■■■□□ 2.65
TSPAN4-202ENST00000397396 PNPLA6Q8IY17 1366 aa31.59■■■□□ 2.65
TSPAN4-202ENST00000397396 CRYBG1Q9Y4K1 1723 aa31.59■■■□□ 2.65
TSPAN4-202ENST00000397396 SOX12O15370 315 aa31.58■■■□□ 2.65
TSPAN4-202ENST00000397396 RRS1Q15050 365 aaKnown RBP31.58■■■□□ 2.65
TSPAN4-202ENST00000397396 EMILIN1Q9Y6C2 1016 aa31.57■■■□□ 2.64
TSPAN4-202ENST00000397396 FLT4P35916 1363 aa31.57■■■□□ 2.64
TSPAN4-202ENST00000397396 COL22A1Q8NFW1 1626 aaPredicted RBP31.57■■■□□ 2.64
TSPAN4-202ENST00000397396 MAP3K19Q56UN5 1328 aa31.57■■■□□ 2.64
TSPAN4-202ENST00000397396 PPM1GO15355 546 aaPredicted RBP31.54■■■□□ 2.64
TSPAN4-202ENST00000397396 AMPHP49418 695 aa31.54■■■□□ 2.64
TSPAN4-202ENST00000397396 ABCC6O95255 1503 aa31.53■■■□□ 2.64
TSPAN4-202ENST00000397396 COL3A1P02461 1466 aaPredicted RBP31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 FBLN1P23142 703 aa31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 HAP1P54257 671 aaPredicted RBP31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 WDR43Q15061 677 aaKnown RBP eCLIP31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 PNISRQ8TF01 805 aaKnown RBP31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 NUDCQ9Y266 331 aa31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 ABCA3Q99758 1704 aa31.52■■■□□ 2.64
TSPAN4-202ENST00000397396 LTN1O94822 1766 aa31.51■■■□□ 2.64
TSPAN4-202ENST00000397396 CPDO75976 1380 aa31.51■■■□□ 2.63
TSPAN4-202ENST00000397396 ARHGEF25Q86VW2 580 aa31.5■■■□□ 2.63
TSPAN4-202ENST00000397396 DIAPH1O60610 1272 aaKnown RBP31.49■■■□□ 2.63
TSPAN4-202ENST00000397396 PEAK1Q9H792 1746 aa31.49■■■□□ 2.63
TSPAN4-202ENST00000397396 SHPRHQ149N8 1683 aa31.47■■■□□ 2.63
TSPAN4-202ENST00000397396 FAM9BQ8IZU0 186 aa31.47■■■□□ 2.63
TSPAN4-202ENST00000397396 CABLES1Q8TDN4 633 aa31.47■■■□□ 2.63
TSPAN4-202ENST00000397396 JCADQ9P266 1359 aa31.46■■■□□ 2.63
TSPAN4-202ENST00000397396 BLMP54132 1417 aaPredicted RBP31.46■■■□□ 2.63
TSPAN4-202ENST00000397396 PLEKHG5O94827 1062 aa31.46■■■□□ 2.63
TSPAN4-202ENST00000397396 HOXC9P31274 260 aa31.46■■■□□ 2.63
TSPAN4-202ENST00000397396 IP6K1Q92551 441 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms