RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
UCA1-201ENST00000397381 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.54
UCA1-201ENST00000397381 HSP90AA2PQ14568 343 aaPredicted RBP11.69□□□□□ -0.54
UCA1-201ENST00000397381 KIF3BO15066 747 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 NUCB1Q02818 461 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
UCA1-201ENST00000397381 NOS1P29475 1434 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 PPLO60437 1756 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 ADGRB1O14514 1584 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
UCA1-201ENST00000397381 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 EXOSC9Q06265 439 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 SSH1Q8WYL5 1049 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 PPRC1Q5VV67 1664 aaKnown RBP11.67□□□□□ -0.54
UCA1-201ENST00000397381 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
UCA1-201ENST00000397381 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
UCA1-201ENST00000397381 TPM2P07951 284 aa11.66□□□□□ -0.54
UCA1-201ENST00000397381 TSR2Q969E8 191 aaKnown RBP11.66□□□□□ -0.54
UCA1-201ENST00000397381 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
UCA1-201ENST00000397381 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
UCA1-201ENST00000397381 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
UCA1-201ENST00000397381 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
UCA1-201ENST00000397381 REREQ9P2R6 1566 aa11.65□□□□□ -0.55
UCA1-201ENST00000397381 TMEM57Q8N5G2 664 aa11.65□□□□□ -0.55
UCA1-201ENST00000397381 RPGRIP1LQ68CZ1 1315 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
UCA1-201ENST00000397381 CD109Q6YHK3 1445 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
UCA1-201ENST00000397381 IBTKQ9P2D0 1353 aaPredicted RBP11.64□□□□□ -0.55
UCA1-201ENST00000397381 CCDC173Q0VFZ6 552 aa11.63□□□□□ -0.55
UCA1-201ENST00000397381 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
UCA1-201ENST00000397381 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
UCA1-201ENST00000397381 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
UCA1-201ENST00000397381 GAS2L3Q86XJ1 694 aa11.63□□□□□ -0.55
UCA1-201ENST00000397381 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
UCA1-201ENST00000397381 GOLGA6L22H0YM25 854 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
UCA1-201ENST00000397381 GCC1Q96CN9 775 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 MED14O60244 1454 aa11.62□□□□□ -0.55
UCA1-201ENST00000397381 GLI2P10070 1586 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
UCA1-201ENST00000397381 KIF2CQ99661 725 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 LNPKQ9C0E8 428 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
UCA1-201ENST00000397381 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 PKNOX2Q96KN3 472 aa11.61□□□□□ -0.55
UCA1-201ENST00000397381 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
UCA1-201ENST00000397381 U2SURPO15042 1029 aaKnown RBP11.6□□□□□ -0.55
UCA1-201ENST00000397381 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
UCA1-201ENST00000397381 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
UCA1-201ENST00000397381 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
UCA1-201ENST00000397381 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.55
UCA1-201ENST00000397381 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.55
UCA1-201ENST00000397381 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.55
UCA1-201ENST00000397381 PIK3R4Q99570 1358 aa11.58□□□□□ -0.56
UCA1-201ENST00000397381 KIDINS220Q9ULH0 1771 aa11.58□□□□□ -0.56
UCA1-201ENST00000397381 TERF1P54274 439 aa11.58□□□□□ -0.56
UCA1-201ENST00000397381 RIPK4P57078 832 aa11.58□□□□□ -0.56
UCA1-201ENST00000397381 PPIP5K1Q6PFW1 1433 aa11.58□□□□□ -0.56
UCA1-201ENST00000397381 TMEM132EQ6IEE7 984 aa11.57□□□□□ -0.56
UCA1-201ENST00000397381 TBC1D9Q6ZT07 1266 aa11.57□□□□□ -0.56
UCA1-201ENST00000397381 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
UCA1-201ENST00000397381 HS1BP3Q53T59 392 aa11.57□□□□□ -0.56
UCA1-201ENST00000397381 ANKRD45Q5TZF3 282 aa11.57□□□□□ -0.56
UCA1-201ENST00000397381 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 CDC45O75419 566 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 SSFA2P28290 1259 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 PDCL3Q9H2J4 239 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 NPATQ14207 1427 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
UCA1-201ENST00000397381 OFD1O75665 1012 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 CD2BP2O95400 341 aaKnown RBP11.56□□□□□ -0.56
UCA1-201ENST00000397381 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
UCA1-201ENST00000397381 ZNF445P59923 1031 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
UCA1-201ENST00000397381 GAS2L2Q8NHY3 880 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
UCA1-201ENST00000397381 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
UCA1-201ENST00000397381 NUCB2P80303 420 aa11.55□□□□□ -0.56
UCA1-201ENST00000397381 RABEP1Q15276 862 aa11.55□□□□□ -0.56
UCA1-201ENST00000397381 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
UCA1-201ENST00000397381 PNPLA6Q8IY17 1366 aa11.55□□□□□ -0.56
UCA1-201ENST00000397381 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms