RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-209ENST00000397113 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
FGFR1-209ENST00000397113 TESK2Q96S53 571 aa12.91□□□□□ -0.34
FGFR1-209ENST00000397113 PIK3C2GO75747 1445 aa12.91□□□□□ -0.34
FGFR1-209ENST00000397113 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
FGFR1-209ENST00000397113 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
FGFR1-209ENST00000397113 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
FGFR1-209ENST00000397113 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
FGFR1-209ENST00000397113 NPATQ14207 1427 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 APBB1O00213 710 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
FGFR1-209ENST00000397113 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 SMC4Q9NTJ3 1288 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 CHMP5Q9NZZ3 219 aa12.9□□□□□ -0.34
FGFR1-209ENST00000397113 ESPNB1AK53 854 aa12.9□□□□□ -0.35
FGFR1-209ENST00000397113 USP19O94966 1318 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 ARHGAP23Q9P227 1491 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 NALCNQ8IZF0 1738 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 MED14O60244 1454 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 MON2Q7Z3U7 1717 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 NWD1Q149M9 1564 aa12.89□□□□□ -0.35
FGFR1-209ENST00000397113 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
FGFR1-209ENST00000397113 MPNDQ8N594 471 aa12.88□□□□□ -0.35
FGFR1-209ENST00000397113 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
FGFR1-209ENST00000397113 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
FGFR1-209ENST00000397113 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-209ENST00000397113 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-209ENST00000397113 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
FGFR1-209ENST00000397113 MRE11P49959 708 aa12.87□□□□□ -0.35
FGFR1-209ENST00000397113 WWC1Q8IX03 1113 aa12.87□□□□□ -0.35
FGFR1-209ENST00000397113 MARF1Q9Y4F3 1742 aaKnown RBP12.87□□□□□ -0.35
FGFR1-209ENST00000397113 MSNP26038 577 aaKnown RBP12.86□□□□□ -0.35
FGFR1-209ENST00000397113 TBC1D32Q96NH3 1257 aa12.86□□□□□ -0.35
FGFR1-209ENST00000397113 TRAK1Q9UPV9 953 aa12.85□□□□□ -0.35
FGFR1-209ENST00000397113 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
FGFR1-209ENST00000397113 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
FGFR1-209ENST00000397113 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
FGFR1-209ENST00000397113 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
FGFR1-209ENST00000397113 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
FGFR1-209ENST00000397113 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
FGFR1-209ENST00000397113 SHPRHQ149N8 1683 aa12.83□□□□□ -0.35
FGFR1-209ENST00000397113 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
FGFR1-209ENST00000397113 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
FGFR1-209ENST00000397113 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 GOLGA6L22H0YM25 854 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 CLCN1P35523 988 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 GBP4Q96PP9 640 aa12.83□□□□□ -0.36
FGFR1-209ENST00000397113 TECPR2O15040 1411 aa12.82□□□□□ -0.36
FGFR1-209ENST00000397113 DNTTIP2Q5QJE6 756 aaKnown RBP12.82□□□□□ -0.36
FGFR1-209ENST00000397113 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
FGFR1-209ENST00000397113 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
FGFR1-209ENST00000397113 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
FGFR1-209ENST00000397113 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
FGFR1-209ENST00000397113 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
FGFR1-209ENST00000397113 ANTXR1Q9H6X2 564 aa12.82□□□□□ -0.36
FGFR1-209ENST00000397113 NOL8Q76FK4 1167 aaKnown RBP12.81□□□□□ -0.36
FGFR1-209ENST00000397113 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
FGFR1-209ENST00000397113 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
FGFR1-209ENST00000397113 ERBB4Q15303 1308 aa12.81□□□□□ -0.36
FGFR1-209ENST00000397113 MTHFSP49914 203 aa12.81□□□□□ -0.36
FGFR1-209ENST00000397113 CHD2O14647 1828 aaKnown RBP12.81□□□□□ -0.36
FGFR1-209ENST00000397113 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
FGFR1-209ENST00000397113 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
FGFR1-209ENST00000397113 A0A0U1RQG5 324 aaPredicted RBP12.8□□□□□ -0.36
FGFR1-209ENST00000397113 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
FGFR1-209ENST00000397113 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
FGFR1-209ENST00000397113 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
FGFR1-209ENST00000397113 ITSN1Q15811 1721 aa12.8□□□□□ -0.36
FGFR1-209ENST00000397113 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
FGFR1-209ENST00000397113 NASPP49321 788 aaPredicted RBP12.8□□□□□ -0.36
FGFR1-209ENST00000397113 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
FGFR1-209ENST00000397113 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
FGFR1-209ENST00000397113 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
FGFR1-209ENST00000397113 RNF214Q8ND24 703 aa12.79□□□□□ -0.36
FGFR1-209ENST00000397113 BLMP54132 1417 aaPredicted RBP12.79□□□□□ -0.36
FGFR1-209ENST00000397113 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
FGFR1-209ENST00000397113 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
FGFR1-209ENST00000397113 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
FGFR1-209ENST00000397113 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.36
FGFR1-209ENST00000397113 KLHL34Q8N239 644 aa12.77□□□□□ -0.36
FGFR1-209ENST00000397113 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.36
FGFR1-209ENST00000397113 SSFA2P28290 1259 aa12.77□□□□□ -0.37
FGFR1-209ENST00000397113 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
FGFR1-209ENST00000397113 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
FGFR1-209ENST00000397113 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
FGFR1-209ENST00000397113 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
FGFR1-209ENST00000397113 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
FGFR1-209ENST00000397113 STK26Q9P289 416 aa12.76□□□□□ -0.37
FGFR1-209ENST00000397113 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
FGFR1-209ENST00000397113 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
FGFR1-209ENST00000397113 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
FGFR1-209ENST00000397113 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
FGFR1-209ENST00000397113 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-209ENST00000397113 PTPRMP28827 1452 aa12.74□□□□□ -0.37
FGFR1-209ENST00000397113 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
FGFR1-209ENST00000397113 A2ML1A8K2U0 1454 aa12.74□□□□□ -0.37
FGFR1-209ENST00000397113 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms