RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 NUCB1Q02818 461 aa18.34■□□□□ 0.53
CCNF-202ENST00000397066 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
CCNF-202ENST00000397066 TET3O43151 1660 aa18.34■□□□□ 0.53
CCNF-202ENST00000397066 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
CCNF-202ENST00000397066 ESPNB1AK53 854 aa18.33■□□□□ 0.53
CCNF-202ENST00000397066 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
CCNF-202ENST00000397066 PTMSP20962 102 aa18.33■□□□□ 0.52
CCNF-202ENST00000397066 SHROOM2Q13796 1616 aa18.32■□□□□ 0.52
CCNF-202ENST00000397066 DDX49Q9Y6V7 483 aaKnown RBP18.32■□□□□ 0.52
CCNF-202ENST00000397066 STAG3Q9UJ98 1225 aa18.32■□□□□ 0.52
CCNF-202ENST00000397066 NSD2O96028 1365 aa18.32■□□□□ 0.52
CCNF-202ENST00000397066 HMOX1P09601 288 aa18.31■□□□□ 0.52
CCNF-202ENST00000397066 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
CCNF-202ENST00000397066 CIZ1Q9ULV3 898 aaPredicted RBP18.31■□□□□ 0.52
CCNF-202ENST00000397066 APBB1O00213 710 aa18.3■□□□□ 0.52
CCNF-202ENST00000397066 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
CCNF-202ENST00000397066 ISY1Q9ULR0 285 aaKnown RBP18.3■□□□□ 0.52
CCNF-202ENST00000397066 IQSEC2Q5JU85 1478 aa18.3■□□□□ 0.52
CCNF-202ENST00000397066 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
CCNF-202ENST00000397066 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
CCNF-202ENST00000397066 SNX21Q969T3 373 aa18.29■□□□□ 0.52
CCNF-202ENST00000397066 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
CCNF-202ENST00000397066 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
CCNF-202ENST00000397066 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
CCNF-202ENST00000397066 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
CCNF-202ENST00000397066 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
CCNF-202ENST00000397066 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
CCNF-202ENST00000397066 CHD1O14646 1710 aa18.28■□□□□ 0.52
CCNF-202ENST00000397066 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
CCNF-202ENST00000397066 IL16Q14005 1332 aa18.28■□□□□ 0.52
CCNF-202ENST00000397066 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
CCNF-202ENST00000397066 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
CCNF-202ENST00000397066 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
CCNF-202ENST00000397066 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
CCNF-202ENST00000397066 TBC1D9Q6ZT07 1266 aa18.27■□□□□ 0.51
CCNF-202ENST00000397066 FYB1O15117 783 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 SSFA2P28290 1259 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 KIF1BO60333 1816 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 CDC45O75419 566 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 MSNP26038 577 aaKnown RBP18.26■□□□□ 0.51
CCNF-202ENST00000397066 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
CCNF-202ENST00000397066 FBLN1P23142 703 aa18.25■□□□□ 0.51
CCNF-202ENST00000397066 NASPP49321 788 aaPredicted RBP18.25■□□□□ 0.51
CCNF-202ENST00000397066 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
CCNF-202ENST00000397066 CFAP65Q6ZU64 1925 aaKnown RBP18.25■□□□□ 0.51
CCNF-202ENST00000397066 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
CCNF-202ENST00000397066 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
CCNF-202ENST00000397066 CABP1Q9NZU7 370 aa18.24■□□□□ 0.51
CCNF-202ENST00000397066 FCHSD2O94868 740 aa18.23■□□□□ 0.51
CCNF-202ENST00000397066 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
CCNF-202ENST00000397066 GAS2L3Q86XJ1 694 aa18.23■□□□□ 0.51
CCNF-202ENST00000397066 GNAI1P63096 354 aa18.22■□□□□ 0.51
CCNF-202ENST00000397066 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
CCNF-202ENST00000397066 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
CCNF-202ENST00000397066 CD109Q6YHK3 1445 aa18.22■□□□□ 0.51
CCNF-202ENST00000397066 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
CCNF-202ENST00000397066 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
CCNF-202ENST00000397066 GAS2L2Q8NHY3 880 aa18.2■□□□□ 0.5
CCNF-202ENST00000397066 SHPRHQ149N8 1683 aa18.2■□□□□ 0.5
CCNF-202ENST00000397066 ZBTB7BO15156 539 aaPredicted RBP18.2■□□□□ 0.5
CCNF-202ENST00000397066 CDK19Q9BWU1 502 aa18.2■□□□□ 0.5
CCNF-202ENST00000397066 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
CCNF-202ENST00000397066 NPATQ14207 1427 aa18.19■□□□□ 0.5
CCNF-202ENST00000397066 CAVIN1Q6NZI2 390 aaKnown RBP18.19■□□□□ 0.5
CCNF-202ENST00000397066 TSPYL6Q8N831 410 aa18.19■□□□□ 0.5
CCNF-202ENST00000397066 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
CCNF-202ENST00000397066 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
CCNF-202ENST00000397066 CCDC173Q0VFZ6 552 aa18.19■□□□□ 0.5
CCNF-202ENST00000397066 ATAD2Q6PL18 1390 aa18.19■□□□□ 0.5
CCNF-202ENST00000397066 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
CCNF-202ENST00000397066 FOXD4L5Q5VV16 416 aaPredicted RBP18.18■□□□□ 0.5
CCNF-202ENST00000397066 FOXD4L4Q8WXT5 416 aaPredicted RBP18.18■□□□□ 0.5
CCNF-202ENST00000397066 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
CCNF-202ENST00000397066 UHRF1BP1LA0JNW5 1464 aa18.18■□□□□ 0.5
CCNF-202ENST00000397066 IDI1Q13907 227 aa18.18■□□□□ 0.5
CCNF-202ENST00000397066 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
CCNF-202ENST00000397066 RABEP1Q15276 862 aa18.17■□□□□ 0.5
CCNF-202ENST00000397066 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
CCNF-202ENST00000397066 BAG4O95429 457 aaKnown RBP18.17■□□□□ 0.5
CCNF-202ENST00000397066 VAMP4O75379 141 aa18.17■□□□□ 0.5
CCNF-202ENST00000397066 NUCB2P80303 420 aa18.17■□□□□ 0.5
CCNF-202ENST00000397066 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
CCNF-202ENST00000397066 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
CCNF-202ENST00000397066 ST18O60284 1047 aa18.16■□□□□ 0.5
CCNF-202ENST00000397066 RRP9O43818 475 aaKnown RBP18.16■□□□□ 0.5
CCNF-202ENST00000397066 ERBB4Q15303 1308 aa18.16■□□□□ 0.5
CCNF-202ENST00000397066 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
CCNF-202ENST00000397066 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
CCNF-202ENST00000397066 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
CCNF-202ENST00000397066 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
CCNF-202ENST00000397066 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.49
CCNF-202ENST00000397066 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
CCNF-202ENST00000397066 RAPGEF3O95398 923 aa18.14■□□□□ 0.49
CCNF-202ENST00000397066 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
CCNF-202ENST00000397066 KLHL40Q2TBA0 621 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 MROH2AA6NES4 1674 aa18.13■□□□□ 0.49
CCNF-202ENST00000397066 PRPF40AO75400 957 aaKnown RBP18.13■□□□□ 0.49
CCNF-202ENST00000397066 DDIT3P35638 169 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms