RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 RXRBP28702 533 aa13.64□□□□□ -0.23
MCF2L-206ENST00000397021 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-206ENST00000397021 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
MCF2L-206ENST00000397021 TMC1Q8TDI8 760 aa13.64□□□□□ -0.23
MCF2L-206ENST00000397021 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
MCF2L-206ENST00000397021 TRPM3Q9HCF6 1732 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-206ENST00000397021 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
MCF2L-206ENST00000397021 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
MCF2L-206ENST00000397021 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
MCF2L-206ENST00000397021 SLC12A5Q9H2X9 1139 aa13.61□□□□□ -0.23
MCF2L-206ENST00000397021 USP6P35125 1406 aa13.61□□□□□ -0.23
MCF2L-206ENST00000397021 BCL9LQ86UU0 1499 aa13.61□□□□□ -0.23
MCF2L-206ENST00000397021 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
MCF2L-206ENST00000397021 TRPC5Q9UL62 973 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-206ENST00000397021 RBM6P78332 1123 aaKnown RBP13.59□□□□□ -0.23
MCF2L-206ENST00000397021 CHRNA2Q15822 529 aa13.59□□□□□ -0.23
MCF2L-206ENST00000397021 UNC5CLQ8IV45 518 aa13.59□□□□□ -0.23
MCF2L-206ENST00000397021 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
MCF2L-206ENST00000397021 NLRP6P59044 892 aa13.58□□□□□ -0.24
MCF2L-206ENST00000397021 TMF1P82094 1093 aa13.58□□□□□ -0.24
MCF2L-206ENST00000397021 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
MCF2L-206ENST00000397021 PRDM11Q9NQV5 511 aa13.58□□□□□ -0.24
MCF2L-206ENST00000397021 SLIT2O94813 1529 aa13.58□□□□□ -0.24
MCF2L-206ENST00000397021 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
MCF2L-206ENST00000397021 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
MCF2L-206ENST00000397021 SSH2Q76I76 1423 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 NLRP13Q86W25 1043 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
MCF2L-206ENST00000397021 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
MCF2L-206ENST00000397021 ATRNO75882 1429 aa13.56□□□□□ -0.24
MCF2L-206ENST00000397021 CPSF1Q10570 1443 aaKnown RBP13.56□□□□□ -0.24
MCF2L-206ENST00000397021 SOX12O15370 315 aa13.56□□□□□ -0.24
MCF2L-206ENST00000397021 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
MCF2L-206ENST00000397021 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
MCF2L-206ENST00000397021 GCP02774 474 aa13.55□□□□□ -0.24
MCF2L-206ENST00000397021 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-206ENST00000397021 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-206ENST00000397021 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
MCF2L-206ENST00000397021 USP19O94966 1318 aa13.55□□□□□ -0.24
MCF2L-206ENST00000397021 RGS12O14924 1447 aa13.55□□□□□ -0.24
MCF2L-206ENST00000397021 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
MCF2L-206ENST00000397021 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
MCF2L-206ENST00000397021 NME9Q86XW9 330 aa13.54□□□□□ -0.24
MCF2L-206ENST00000397021 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
MCF2L-206ENST00000397021 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
MCF2L-206ENST00000397021 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-206ENST00000397021 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
MCF2L-206ENST00000397021 VPS72Q15906 364 aa13.53□□□□□ -0.24
MCF2L-206ENST00000397021 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
MCF2L-206ENST00000397021 TERF2IPQ9NYB0 399 aa13.53□□□□□ -0.24
MCF2L-206ENST00000397021 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.25
MCF2L-206ENST00000397021 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
MCF2L-206ENST00000397021 MARF1Q9Y4F3 1742 aaKnown RBP13.51□□□□□ -0.25
MCF2L-206ENST00000397021 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
MCF2L-206ENST00000397021 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-206ENST00000397021 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
MCF2L-206ENST00000397021 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
MCF2L-206ENST00000397021 EVA1CP58658 441 aa13.49□□□□□ -0.25
MCF2L-206ENST00000397021 CDCA8Q53HL2 280 aa13.49□□□□□ -0.25
MCF2L-206ENST00000397021 PIK3C2AO00443 1686 aa13.49□□□□□ -0.25
MCF2L-206ENST00000397021 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
MCF2L-206ENST00000397021 CPDO75976 1380 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 A0A0G2JS52 829 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 MYT1Q01538 1121 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
MCF2L-206ENST00000397021 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 GLI3P10071 1580 aa13.48□□□□□ -0.25
MCF2L-206ENST00000397021 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
MCF2L-206ENST00000397021 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
MCF2L-206ENST00000397021 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 SLIT3O75094 1523 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
MCF2L-206ENST00000397021 USP31Q70CQ4 1352 aa13.46□□□□□ -0.25
MCF2L-206ENST00000397021 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.25
MCF2L-206ENST00000397021 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.25
MCF2L-206ENST00000397021 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-206ENST00000397021 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
MCF2L-206ENST00000397021 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
MCF2L-206ENST00000397021 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
MCF2L-206ENST00000397021 CAMTA1Q9Y6Y1 1673 aa13.46□□□□□ -0.26
MCF2L-206ENST00000397021 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
MCF2L-206ENST00000397021 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
MCF2L-206ENST00000397021 FBLN1P23142 703 aa13.44□□□□□ -0.26
MCF2L-206ENST00000397021 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
MCF2L-206ENST00000397021 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
MCF2L-206ENST00000397021 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
MCF2L-206ENST00000397021 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
MCF2L-206ENST00000397021 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-206ENST00000397021 COG3Q96JB2 828 aa13.43□□□□□ -0.26
MCF2L-206ENST00000397021 NWD2Q9ULI1 1742 aa13.43□□□□□ -0.26
MCF2L-206ENST00000397021 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
MCF2L-206ENST00000397021 FYB1O15117 783 aa13.42□□□□□ -0.26
MCF2L-206ENST00000397021 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms