RNA–Protein interactions for RNA: ENST00000397015.6

PPARG-207, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 1,722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-207ENST00000397015 GTF3C3Q9Y5Q9 886 aa11.97□□□□□ -0.49
PPARG-207ENST00000397015 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
PPARG-207ENST00000397015 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
PPARG-207ENST00000397015 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
PPARG-207ENST00000397015 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.49
PPARG-207ENST00000397015 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
PPARG-207ENST00000397015 ITSN1Q15811 1721 aa11.96□□□□□ -0.5
PPARG-207ENST00000397015 ESCO1Q5FWF5 840 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
PPARG-207ENST00000397015 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 MON2Q7Z3U7 1717 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 FMN2Q9NZ56 1722 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
PPARG-207ENST00000397015 ATF3P18847 181 aa11.94□□□□□ -0.5
PPARG-207ENST00000397015 PNPLA6Q8IY17 1366 aa11.94□□□□□ -0.5
PPARG-207ENST00000397015 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
PPARG-207ENST00000397015 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
PPARG-207ENST00000397015 PSME1Q06323 249 aa11.93□□□□□ -0.5
PPARG-207ENST00000397015 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
PPARG-207ENST00000397015 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
PPARG-207ENST00000397015 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
PPARG-207ENST00000397015 USP31Q70CQ4 1352 aa11.93□□□□□ -0.5
PPARG-207ENST00000397015 U2AF1L5P0DN76 240 aaPredicted RBP11.92□□□□□ -0.5
PPARG-207ENST00000397015 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
PPARG-207ENST00000397015 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
PPARG-207ENST00000397015 NALCNQ8IZF0 1738 aa11.92□□□□□ -0.5
PPARG-207ENST00000397015 DCCP43146 1447 aa11.92□□□□□ -0.5
PPARG-207ENST00000397015 PPM1GO15355 546 aaPredicted RBP11.91□□□□□ -0.5
PPARG-207ENST00000397015 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
PPARG-207ENST00000397015 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
PPARG-207ENST00000397015 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
PPARG-207ENST00000397015 NLRP6P59044 892 aa11.91□□□□□ -0.5
PPARG-207ENST00000397015 APAF1O14727 1248 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
PPARG-207ENST00000397015 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
PPARG-207ENST00000397015 NEFLP07196 543 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 OVOS2A0A0J9YW53 1432 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 OVOS2Q6IE36 1432 aa11.9□□□□□ -0.5
PPARG-207ENST00000397015 MSH6P52701 1360 aa11.89□□□□□ -0.51
PPARG-207ENST00000397015 FCHSD2O94868 740 aa11.89□□□□□ -0.51
PPARG-207ENST00000397015 NEFMP07197 916 aa11.89□□□□□ -0.51
PPARG-207ENST00000397015 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
PPARG-207ENST00000397015 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
PPARG-207ENST00000397015 NRKQ7Z2Y5 1582 aa11.88□□□□□ -0.51
PPARG-207ENST00000397015 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
PPARG-207ENST00000397015 FBLN1P23142 703 aa11.88□□□□□ -0.51
PPARG-207ENST00000397015 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
PPARG-207ENST00000397015 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
PPARG-207ENST00000397015 COL3A1P02461 1466 aaPredicted RBP11.87□□□□□ -0.51
PPARG-207ENST00000397015 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
PPARG-207ENST00000397015 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
PPARG-207ENST00000397015 FOXO3O43524 673 aa11.87□□□□□ -0.51
PPARG-207ENST00000397015 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
PPARG-207ENST00000397015 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
PPARG-207ENST00000397015 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
PPARG-207ENST00000397015 IL13P35225 146 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 SUPT16HQ9Y5B9 1047 aaKnown RBP11.86□□□□□ -0.51
PPARG-207ENST00000397015 KIF24Q5T7B8 1368 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
PPARG-207ENST00000397015 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
PPARG-207ENST00000397015 ZNF335Q9H4Z2 1342 aaPredicted RBP11.85□□□□□ -0.51
PPARG-207ENST00000397015 MST1RQ04912 1400 aa11.84□□□□□ -0.51
PPARG-207ENST00000397015 AMPHP49418 695 aa11.84□□□□□ -0.51
PPARG-207ENST00000397015 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
PPARG-207ENST00000397015 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
PPARG-207ENST00000397015 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
PPARG-207ENST00000397015 SBNO1A3KN83 1393 aa11.84□□□□□ -0.51
PPARG-207ENST00000397015 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 E9PSI1 815 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 SOX12O15370 315 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 NUTM2GQ5VZR2 741 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
PPARG-207ENST00000397015 FLT4P35916 1363 aa11.82□□□□□ -0.52
PPARG-207ENST00000397015 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
PPARG-207ENST00000397015 SLFN5Q08AF3 891 aa11.82□□□□□ -0.52
PPARG-207ENST00000397015 ERICH6BQ5W0A0 696 aa11.82□□□□□ -0.52
PPARG-207ENST00000397015 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
PPARG-207ENST00000397015 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
PPARG-207ENST00000397015 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
PPARG-207ENST00000397015 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
PPARG-207ENST00000397015 FKBP8Q14318 412 aa11.81□□□□□ -0.52
PPARG-207ENST00000397015 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
PPARG-207ENST00000397015 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
PPARG-207ENST00000397015 SLAIN2Q9P270 581 aa11.81□□□□□ -0.52
PPARG-207ENST00000397015 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
PPARG-207ENST00000397015 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
PPARG-207ENST00000397015 TRMT2AQ8IZ69 625 aaKnown RBP11.8□□□□□ -0.52
PPARG-207ENST00000397015 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms