RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 COL3A1P02461 1466 aaPredicted RBP17.8■□□□□ 0.44
PPARG-206ENST00000397012 STRCP1A6NGW2 1772 aa17.8■□□□□ 0.44
PPARG-206ENST00000397012 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
PPARG-206ENST00000397012 PNPLA6Q8IY17 1366 aa17.8■□□□□ 0.44
PPARG-206ENST00000397012 HSPA2P54652 639 aa17.8■□□□□ 0.44
PPARG-206ENST00000397012 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
PPARG-206ENST00000397012 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
PPARG-206ENST00000397012 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
PPARG-206ENST00000397012 PDE3BQ13370 1112 aa17.77■□□□□ 0.44
PPARG-206ENST00000397012 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.44
PPARG-206ENST00000397012 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.44
PPARG-206ENST00000397012 RBM33Q96EV2 1170 aaKnown RBP17.77■□□□□ 0.43
PPARG-206ENST00000397012 COG3Q96JB2 828 aa17.77■□□□□ 0.43
PPARG-206ENST00000397012 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
PPARG-206ENST00000397012 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
PPARG-206ENST00000397012 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
PPARG-206ENST00000397012 PROSER2Q86WR7 435 aaPredicted RBP17.76■□□□□ 0.43
PPARG-206ENST00000397012 NGDNQ8NEJ9 315 aaKnown RBP17.76■□□□□ 0.43
PPARG-206ENST00000397012 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
PPARG-206ENST00000397012 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
PPARG-206ENST00000397012 USP54Q70EL1 1684 aa17.74■□□□□ 0.43
PPARG-206ENST00000397012 USP31Q70CQ4 1352 aa17.74■□□□□ 0.43
PPARG-206ENST00000397012 NGEFQ8N5V2 710 aa17.74■□□□□ 0.43
PPARG-206ENST00000397012 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
PPARG-206ENST00000397012 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
PPARG-206ENST00000397012 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
PPARG-206ENST00000397012 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
PPARG-206ENST00000397012 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
PPARG-206ENST00000397012 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
PPARG-206ENST00000397012 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
PPARG-206ENST00000397012 FBLN1P23142 703 aa17.71■□□□□ 0.42
PPARG-206ENST00000397012 C14orf37Q86TY3 774 aa17.71■□□□□ 0.42
PPARG-206ENST00000397012 DCCP43146 1447 aa17.7■□□□□ 0.42
PPARG-206ENST00000397012 APAF1O14727 1248 aa17.7■□□□□ 0.42
PPARG-206ENST00000397012 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
PPARG-206ENST00000397012 MARF1Q9Y4F3 1742 aaKnown RBP17.7■□□□□ 0.42
PPARG-206ENST00000397012 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
PPARG-206ENST00000397012 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
PPARG-206ENST00000397012 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
PPARG-206ENST00000397012 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
PPARG-206ENST00000397012 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
PPARG-206ENST00000397012 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
PPARG-206ENST00000397012 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
PPARG-206ENST00000397012 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
PPARG-206ENST00000397012 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
PPARG-206ENST00000397012 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
PPARG-206ENST00000397012 ESCO1Q5FWF5 840 aa17.67■□□□□ 0.42
PPARG-206ENST00000397012 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
PPARG-206ENST00000397012 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
PPARG-206ENST00000397012 CDCA7LQ96GN5 454 aa17.65■□□□□ 0.42
PPARG-206ENST00000397012 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
PPARG-206ENST00000397012 PLEKHF1Q96S99 279 aa17.65■□□□□ 0.42
PPARG-206ENST00000397012 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
PPARG-206ENST00000397012 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
PPARG-206ENST00000397012 MST1RQ04912 1400 aa17.64■□□□□ 0.41
PPARG-206ENST00000397012 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
PPARG-206ENST00000397012 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
PPARG-206ENST00000397012 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
PPARG-206ENST00000397012 IL13P35225 146 aa17.64■□□□□ 0.41
PPARG-206ENST00000397012 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
PPARG-206ENST00000397012 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 NEFLP07196 543 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 FCHSD2O94868 740 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 NLRP6P59044 892 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
PPARG-206ENST00000397012 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
PPARG-206ENST00000397012 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
PPARG-206ENST00000397012 ATF3P18847 181 aa17.61■□□□□ 0.41
PPARG-206ENST00000397012 PSME1Q06323 249 aa17.61■□□□□ 0.41
PPARG-206ENST00000397012 FKBP8Q14318 412 aa17.61■□□□□ 0.41
PPARG-206ENST00000397012 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
PPARG-206ENST00000397012 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
PPARG-206ENST00000397012 ABTB2Q8N961 1025 aa17.6■□□□□ 0.41
PPARG-206ENST00000397012 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
PPARG-206ENST00000397012 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
PPARG-206ENST00000397012 DUSP27Q5VZP5 1158 aa17.59■□□□□ 0.41
PPARG-206ENST00000397012 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
PPARG-206ENST00000397012 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
PPARG-206ENST00000397012 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
PPARG-206ENST00000397012 MSH6P52701 1360 aa17.59■□□□□ 0.41
PPARG-206ENST00000397012 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.41
PPARG-206ENST00000397012 SBNO1A3KN83 1393 aa17.58■□□□□ 0.4
PPARG-206ENST00000397012 FOXO3O43524 673 aa17.58■□□□□ 0.4
PPARG-206ENST00000397012 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
PPARG-206ENST00000397012 ZNF335Q9H4Z2 1342 aaPredicted RBP17.58■□□□□ 0.4
PPARG-206ENST00000397012 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
PPARG-206ENST00000397012 FLT4P35916 1363 aa17.56■□□□□ 0.4
PPARG-206ENST00000397012 WDR63Q8IWG1 891 aa17.56■□□□□ 0.4
PPARG-206ENST00000397012 E9PSI1 815 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
PPARG-206ENST00000397012 NFAT5O94916 1531 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
PPARG-206ENST00000397012 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
PPARG-206ENST00000397012 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
PPARG-206ENST00000397012 ALS2Q96Q42 1657 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
PPARG-206ENST00000397012 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms