RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 AKAP12Q02952 1782 aa24.03■■□□□ 1.44
AP1S3-203ENST00000396654 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
AP1S3-203ENST00000396654 CRYBG1Q9Y4K1 1723 aa24■■□□□ 1.43
AP1S3-203ENST00000396654 ATAD2Q6PL18 1390 aa24■■□□□ 1.43
AP1S3-203ENST00000396654 ZNF772Q68DY9 489 aaPredicted RBP23.99■■□□□ 1.43
AP1S3-203ENST00000396654 TESK2Q96S53 571 aa23.99■■□□□ 1.43
AP1S3-203ENST00000396654 TMC1Q8TDI8 760 aa23.97■■□□□ 1.43
AP1S3-203ENST00000396654 PHRF1Q9P1Y6 1649 aaKnown RBP23.96■■□□□ 1.43
AP1S3-203ENST00000396654 USP6P35125 1406 aa23.96■■□□□ 1.43
AP1S3-203ENST00000396654 USP21Q9UK80 565 aa23.95■■□□□ 1.42
AP1S3-203ENST00000396654 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
AP1S3-203ENST00000396654 MON2Q7Z3U7 1717 aa23.94■■□□□ 1.42
AP1S3-203ENST00000396654 ABTB2Q8N961 1025 aa23.94■■□□□ 1.42
AP1S3-203ENST00000396654 SLC12A5Q9H2X9 1139 aa23.91■■□□□ 1.42
AP1S3-203ENST00000396654 PIK3C2AO00443 1686 aa23.91■■□□□ 1.42
AP1S3-203ENST00000396654 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
AP1S3-203ENST00000396654 QTRT2Q9H974 415 aaKnown RBP23.9■■□□□ 1.42
AP1S3-203ENST00000396654 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
AP1S3-203ENST00000396654 TMF1P82094 1093 aa23.89■■□□□ 1.41
AP1S3-203ENST00000396654 FNBP4Q8N3X1 1017 aaPredicted RBP23.89■■□□□ 1.41
AP1S3-203ENST00000396654 CPSF1Q10570 1443 aaKnown RBP23.88■■□□□ 1.41
AP1S3-203ENST00000396654 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
AP1S3-203ENST00000396654 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
AP1S3-203ENST00000396654 RXRBP28702 533 aa23.87■■□□□ 1.41
AP1S3-203ENST00000396654 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
AP1S3-203ENST00000396654 SSH2Q76I76 1423 aa23.86■■□□□ 1.41
AP1S3-203ENST00000396654 COL14A1Q05707 1796 aaKnown RBP23.86■■□□□ 1.41
AP1S3-203ENST00000396654 FAM83GA6ND36 823 aa23.86■■□□□ 1.41
AP1S3-203ENST00000396654 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
AP1S3-203ENST00000396654 NWD2Q9ULI1 1742 aa23.86■■□□□ 1.41
AP1S3-203ENST00000396654 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
AP1S3-203ENST00000396654 SLIT2O94813 1529 aa23.85■■□□□ 1.41
AP1S3-203ENST00000396654 NLRP6P59044 892 aa23.85■■□□□ 1.41
AP1S3-203ENST00000396654 ZC3H6P61129 1189 aaKnown RBP23.85■■□□□ 1.41
AP1S3-203ENST00000396654 BRD4O60885 1362 aaPredicted RBP23.84■■□□□ 1.41
AP1S3-203ENST00000396654 SOCS7O14512 581 aa23.84■■□□□ 1.41
AP1S3-203ENST00000396654 HSPA5P11021 654 aaKnown RBP23.84■■□□□ 1.41
AP1S3-203ENST00000396654 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
AP1S3-203ENST00000396654 NLRP13Q86W25 1043 aa23.84■■□□□ 1.41
AP1S3-203ENST00000396654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
AP1S3-203ENST00000396654 TRPC5Q9UL62 973 aaPredicted RBP23.84■■□□□ 1.41
AP1S3-203ENST00000396654 NRAPQ86VF7 1730 aa23.84■■□□□ 1.41
AP1S3-203ENST00000396654 KIAA0232Q92628 1395 aa23.83■■□□□ 1.41
AP1S3-203ENST00000396654 SLC24A1O60721 1099 aa23.83■■□□□ 1.41
AP1S3-203ENST00000396654 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
AP1S3-203ENST00000396654 CHRNA2Q15822 529 aa23.83■■□□□ 1.41
AP1S3-203ENST00000396654 PUS7Q96PZ0 661 aaKnown RBP23.83■■□□□ 1.41
AP1S3-203ENST00000396654 PRDM11Q9NQV5 511 aa23.83■■□□□ 1.41
AP1S3-203ENST00000396654 ATRNO75882 1429 aa23.83■■□□□ 1.4
AP1S3-203ENST00000396654 A0A1W2PP64 1363 aa23.82■■□□□ 1.4
AP1S3-203ENST00000396654 ZBTB7CA1YPR0 619 aa23.82■■□□□ 1.4
AP1S3-203ENST00000396654 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
AP1S3-203ENST00000396654 USP19O94966 1318 aa23.82■■□□□ 1.4
AP1S3-203ENST00000396654 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
AP1S3-203ENST00000396654 UNC5CLQ8IV45 518 aa23.81■■□□□ 1.4
AP1S3-203ENST00000396654 MYOM1P52179 1685 aa23.8■■□□□ 1.4
AP1S3-203ENST00000396654 SOX12O15370 315 aa23.8■■□□□ 1.4
AP1S3-203ENST00000396654 TERF2IPQ9NYB0 399 aa23.8■■□□□ 1.4
AP1S3-203ENST00000396654 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
AP1S3-203ENST00000396654 BTG4Q9NY30 223 aa23.79■■□□□ 1.4
AP1S3-203ENST00000396654 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
AP1S3-203ENST00000396654 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
AP1S3-203ENST00000396654 NME9Q86XW9 330 aa23.78■■□□□ 1.4
AP1S3-203ENST00000396654 SLIT3O75094 1523 aa23.78■■□□□ 1.4
AP1S3-203ENST00000396654 RGS12O14924 1447 aa23.77■■□□□ 1.4
AP1S3-203ENST00000396654 GCP02774 474 aa23.77■■□□□ 1.4
AP1S3-203ENST00000396654 GLI3P10071 1580 aa23.77■■□□□ 1.4
AP1S3-203ENST00000396654 NINLQ9Y2I6 1382 aa23.77■■□□□ 1.4
AP1S3-203ENST00000396654 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
AP1S3-203ENST00000396654 EDC4Q6P2E9 1401 aaKnown RBP23.76■■□□□ 1.39
AP1S3-203ENST00000396654 GJD4Q96KN9 370 aaPredicted RBP23.75■■□□□ 1.39
AP1S3-203ENST00000396654 STRN4Q9NRL3 753 aa23.73■■□□□ 1.39
AP1S3-203ENST00000396654 ANKRD36BQ8N2N9 1353 aa23.73■■□□□ 1.39
AP1S3-203ENST00000396654 CDK12Q9NYV4 1490 aaPredicted RBP23.73■■□□□ 1.39
AP1S3-203ENST00000396654 RGPD5Q99666 1765 aa23.73■■□□□ 1.39
AP1S3-203ENST00000396654 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
AP1S3-203ENST00000396654 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
AP1S3-203ENST00000396654 VPS72Q15906 364 aa23.71■■□□□ 1.39
AP1S3-203ENST00000396654 CPDO75976 1380 aa23.7■■□□□ 1.38
AP1S3-203ENST00000396654 KIF20BQ96Q89 1820 aa23.7■■□□□ 1.38
AP1S3-203ENST00000396654 CAMTA1Q9Y6Y1 1673 aa23.7■■□□□ 1.38
AP1S3-203ENST00000396654 BRWD3Q6RI45 1802 aa23.69■■□□□ 1.38
AP1S3-203ENST00000396654 LTN1O94822 1766 aa23.69■■□□□ 1.38
AP1S3-203ENST00000396654 NFAT5O94916 1531 aa23.68■■□□□ 1.38
AP1S3-203ENST00000396654 COL18A1P39060 1754 aa23.68■■□□□ 1.38
AP1S3-203ENST00000396654 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
AP1S3-203ENST00000396654 EVA1CP58658 441 aa23.67■■□□□ 1.38
AP1S3-203ENST00000396654 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
AP1S3-203ENST00000396654 A0A0G2JS52 829 aa23.65■■□□□ 1.38
AP1S3-203ENST00000396654 C11orf95C9JLR9 678 aaPredicted RBP23.65■■□□□ 1.38
AP1S3-203ENST00000396654 MYT1Q01538 1121 aa23.65■■□□□ 1.38
AP1S3-203ENST00000396654 OVOS2A0A0J9YW53 1432 aa23.64■■□□□ 1.37
AP1S3-203ENST00000396654 OVOS2Q6IE36 1432 aa23.64■■□□□ 1.37
AP1S3-203ENST00000396654 USP35Q9P2H5 1018 aa23.63■■□□□ 1.37
AP1S3-203ENST00000396654 NSD3Q9BZ95 1437 aa23.62■■□□□ 1.37
AP1S3-203ENST00000396654 FAM98CQ17RN3 349 aaKnown RBP23.62■■□□□ 1.37
AP1S3-203ENST00000396654 LARP1Q6PKG0 1096 aaKnown RBP23.62■■□□□ 1.37
AP1S3-203ENST00000396654 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
AP1S3-203ENST00000396654 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
AP1S3-203ENST00000396654 GGNBP2Q9H3C7 697 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms