RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
CLTA-203ENST00000396603 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
CLTA-203ENST00000396603 SF3B2Q13435 895 aaKnown RBP23.69■■□□□ 1.38
CLTA-203ENST00000396603 NUDT16Q96DE0 195 aaKnown RBP23.69■■□□□ 1.38
CLTA-203ENST00000396603 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
CLTA-203ENST00000396603 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
CLTA-203ENST00000396603 POLR3AO14802 1390 aaPredicted RBP23.68■■□□□ 1.38
CLTA-203ENST00000396603 CCDC61Q9Y6R9 512 aa23.66■■□□□ 1.38
CLTA-203ENST00000396603 TOPAZ1Q8N9V7 1692 aa23.66■■□□□ 1.38
CLTA-203ENST00000396603 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
CLTA-203ENST00000396603 PLEKHG3A1L390 1219 aa23.64■■□□□ 1.37
CLTA-203ENST00000396603 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.37
CLTA-203ENST00000396603 CDK19Q9BWU1 502 aa23.64■■□□□ 1.37
CLTA-203ENST00000396603 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
CLTA-203ENST00000396603 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
CLTA-203ENST00000396603 PRDM11Q9NQV5 511 aa23.63■■□□□ 1.37
CLTA-203ENST00000396603 FAM98CQ17RN3 349 aaKnown RBP23.61■■□□□ 1.37
CLTA-203ENST00000396603 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
CLTA-203ENST00000396603 PHRF1Q9P1Y6 1649 aaKnown RBP23.6■■□□□ 1.37
CLTA-203ENST00000396603 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
CLTA-203ENST00000396603 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
CLTA-203ENST00000396603 ACEP12821 1306 aa23.59■■□□□ 1.37
CLTA-203ENST00000396603 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
CLTA-203ENST00000396603 A0A0G2JS52 829 aa23.58■■□□□ 1.37
CLTA-203ENST00000396603 MYT1Q01538 1121 aa23.58■■□□□ 1.37
CLTA-203ENST00000396603 BAG6P46379 1132 aa23.57■■□□□ 1.36
CLTA-203ENST00000396603 DEFB132Q7Z7B7 95 aa23.57■■□□□ 1.36
CLTA-203ENST00000396603 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
CLTA-203ENST00000396603 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
CLTA-203ENST00000396603 CPDO75976 1380 aa23.55■■□□□ 1.36
CLTA-203ENST00000396603 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
CLTA-203ENST00000396603 NBPF1Q3BBV0 1214 aa23.54■■□□□ 1.36
CLTA-203ENST00000396603 USP19O94966 1318 aa23.54■■□□□ 1.36
CLTA-203ENST00000396603 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
CLTA-203ENST00000396603 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
CLTA-203ENST00000396603 PPIP5K1Q6PFW1 1433 aa23.51■■□□□ 1.35
CLTA-203ENST00000396603 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
CLTA-203ENST00000396603 SRPK2P78362 688 aaKnown RBP23.5■■□□□ 1.35
CLTA-203ENST00000396603 BARGINQ6ZT62 677 aa23.5■■□□□ 1.35
CLTA-203ENST00000396603 NLRP13Q86W25 1043 aa23.5■■□□□ 1.35
CLTA-203ENST00000396603 SSH2Q76I76 1423 aa23.49■■□□□ 1.35
CLTA-203ENST00000396603 LRP5O75197 1615 aa23.48■■□□□ 1.35
CLTA-203ENST00000396603 ZC3H6P61129 1189 aaKnown RBP23.48■■□□□ 1.35
CLTA-203ENST00000396603 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
CLTA-203ENST00000396603 CHRNA2Q15822 529 aa23.47■■□□□ 1.35
CLTA-203ENST00000396603 FAM196AQ6ZSG2 479 aa23.47■■□□□ 1.35
CLTA-203ENST00000396603 QRICH2Q9H0J4 1663 aa23.47■■□□□ 1.35
CLTA-203ENST00000396603 THRAP3Q9Y2W1 955 aaKnown RBP23.46■■□□□ 1.35
CLTA-203ENST00000396603 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
CLTA-203ENST00000396603 STRN4Q9NRL3 753 aa23.45■■□□□ 1.34
CLTA-203ENST00000396603 CAMTA1Q9Y6Y1 1673 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 USP6P35125 1406 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 GCP02774 474 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 EVA1CP58658 441 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 NUTM2GQ5VZR2 741 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 L3MBTL2Q969R5 705 aa23.44■■□□□ 1.34
CLTA-203ENST00000396603 TNS1Q9HBL0 1735 aaKnown RBP23.43■■□□□ 1.34
CLTA-203ENST00000396603 CABP2Q9NPB3 220 aa23.43■■□□□ 1.34
CLTA-203ENST00000396603 EVC2Q86UK5 1308 aa23.42■■□□□ 1.34
CLTA-203ENST00000396603 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
CLTA-203ENST00000396603 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
CLTA-203ENST00000396603 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
CLTA-203ENST00000396603 SLIT3O75094 1523 aa23.41■■□□□ 1.34
CLTA-203ENST00000396603 EN1Q05925 392 aaPredicted RBP23.4■■□□□ 1.34
CLTA-203ENST00000396603 COL5A2P05997 1499 aaPredicted RBP23.4■■□□□ 1.34
CLTA-203ENST00000396603 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
CLTA-203ENST00000396603 AATKQ6ZMQ8 1374 aa23.39■■□□□ 1.33
CLTA-203ENST00000396603 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
CLTA-203ENST00000396603 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
CLTA-203ENST00000396603 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
CLTA-203ENST00000396603 CRB1P82279 1406 aa23.37■■□□□ 1.33
CLTA-203ENST00000396603 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
CLTA-203ENST00000396603 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
CLTA-203ENST00000396603 USP35Q9P2H5 1018 aa23.36■■□□□ 1.33
CLTA-203ENST00000396603 NLRP6P59044 892 aa23.35■■□□□ 1.33
CLTA-203ENST00000396603 CAMKK2Q96RR4 588 aa23.35■■□□□ 1.33
CLTA-203ENST00000396603 PARP4Q9UKK3 1724 aaKnown RBP23.35■■□□□ 1.33
CLTA-203ENST00000396603 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
CLTA-203ENST00000396603 TRIM37O94972 964 aa23.33■■□□□ 1.33
CLTA-203ENST00000396603 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
CLTA-203ENST00000396603 EZH2Q15910 746 aaKnown RBP23.32■■□□□ 1.32
CLTA-203ENST00000396603 TTC21AQ8NDW8 1320 aa23.32■■□□□ 1.32
CLTA-203ENST00000396603 PIK3C2AO00443 1686 aa23.32■■□□□ 1.32
CLTA-203ENST00000396603 PSDA5PKW4 1024 aaPredicted RBP23.31■■□□□ 1.32
CLTA-203ENST00000396603 KCNH5Q8NCM2 988 aa23.31■■□□□ 1.32
CLTA-203ENST00000396603 APBA3O96018 575 aa23.3■■□□□ 1.32
CLTA-203ENST00000396603 SIN3AQ96ST3 1273 aa23.3■■□□□ 1.32
CLTA-203ENST00000396603 CPSF1Q10570 1443 aaKnown RBP23.3■■□□□ 1.32
CLTA-203ENST00000396603 ABCC6O95255 1503 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 OVOS2A0A0G2JMS6 1433 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 OVOS2A0A0J9YW53 1432 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 OVOS2Q6IE36 1432 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 CDCA7Q9BWT1 371 aaPredicted RBP23.28■■□□□ 1.32
CLTA-203ENST00000396603 RREB1Q92766 1687 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 TTC21BQ7Z4L5 1316 aa23.28■■□□□ 1.32
CLTA-203ENST00000396603 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
CLTA-203ENST00000396603 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
CLTA-203ENST00000396603 COL18A1P39060 1754 aa23.27■■□□□ 1.32
CLTA-203ENST00000396603 WDR17Q8IZU2 1322 aa23.26■■□□□ 1.31
CLTA-203ENST00000396603 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms