RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 GGNBP2Q9H3C7 697 aa18.87■□□□□ 0.61
GNE-202ENST00000396594 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
GNE-202ENST00000396594 ANKRD1Q15327 319 aa18.87■□□□□ 0.61
GNE-202ENST00000396594 NAT10Q9H0A0 1025 aaKnown RBP18.87■□□□□ 0.61
GNE-202ENST00000396594 GNAI2P04899 355 aa18.87■□□□□ 0.61
GNE-202ENST00000396594 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
GNE-202ENST00000396594 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
GNE-202ENST00000396594 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
GNE-202ENST00000396594 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
GNE-202ENST00000396594 CCDC73Q6ZRK6 1079 aa18.85■□□□□ 0.61
GNE-202ENST00000396594 ELL2O00472 640 aaPredicted RBP18.85■□□□□ 0.61
GNE-202ENST00000396594 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
GNE-202ENST00000396594 APPP05067 770 aa18.84■□□□□ 0.61
GNE-202ENST00000396594 NFXL1Q6ZNB6 911 aa18.84■□□□□ 0.61
GNE-202ENST00000396594 RABEP1Q15276 862 aa18.84■□□□□ 0.61
GNE-202ENST00000396594 NUP160Q12769 1436 aa18.84■□□□□ 0.61
GNE-202ENST00000396594 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
GNE-202ENST00000396594 MBD3O95983 291 aa18.83■□□□□ 0.61
GNE-202ENST00000396594 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.61
GNE-202ENST00000396594 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
GNE-202ENST00000396594 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
GNE-202ENST00000396594 MSH5O43196 834 aa18.82■□□□□ 0.6
GNE-202ENST00000396594 A0A0U1RQG5 324 aaPredicted RBP18.82■□□□□ 0.6
GNE-202ENST00000396594 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
GNE-202ENST00000396594 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
GNE-202ENST00000396594 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
GNE-202ENST00000396594 AMOTQ4VCS5 1084 aa18.81■□□□□ 0.6
GNE-202ENST00000396594 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
GNE-202ENST00000396594 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 ABCC5O15440 1437 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 CCP110O43303 1012 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 CCDC43Q96MW1 224 aaKnown RBP18.8■□□□□ 0.6
GNE-202ENST00000396594 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
GNE-202ENST00000396594 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 NACAP1Q9BZK3 213 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 MCTP1Q6DN14 999 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
GNE-202ENST00000396594 JMYQ8N9B5 988 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
GNE-202ENST00000396594 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
GNE-202ENST00000396594 ZNF396Q96N95 335 aaPredicted RBP18.78■□□□□ 0.6
GNE-202ENST00000396594 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
GNE-202ENST00000396594 TMEM132EQ6IEE7 984 aa18.78■□□□□ 0.6
GNE-202ENST00000396594 CABP4P57796 275 aa18.78■□□□□ 0.6
GNE-202ENST00000396594 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
GNE-202ENST00000396594 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
GNE-202ENST00000396594 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.6
GNE-202ENST00000396594 DHX29Q7Z478 1369 aaKnown RBP18.77■□□□□ 0.6
GNE-202ENST00000396594 HMOX1P09601 288 aa18.77■□□□□ 0.6
GNE-202ENST00000396594 CDR1P51861 262 aa18.77■□□□□ 0.6
GNE-202ENST00000396594 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
GNE-202ENST00000396594 RAPGEF6Q8TEU7 1601 aa18.77■□□□□ 0.6
GNE-202ENST00000396594 KRT32Q14532 448 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 ALDH1L2Q3SY69 923 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 RDXP35241 583 aaKnown RBP18.76■□□□□ 0.59
GNE-202ENST00000396594 BICD2Q8TD16 824 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 CTNNA3Q9UI47 895 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
GNE-202ENST00000396594 TXLNAP40222 546 aa18.75■□□□□ 0.59
GNE-202ENST00000396594 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
GNE-202ENST00000396594 ACBD3Q9H3P7 528 aa18.75■□□□□ 0.59
GNE-202ENST00000396594 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
GNE-202ENST00000396594 FANCAO15360 1455 aa18.75■□□□□ 0.59
GNE-202ENST00000396594 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
GNE-202ENST00000396594 GZF1Q9H116 711 aaPredicted RBP18.74■□□□□ 0.59
GNE-202ENST00000396594 SF3B2Q13435 895 aaKnown RBP18.74■□□□□ 0.59
GNE-202ENST00000396594 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
GNE-202ENST00000396594 WASHC4Q2M389 1173 aa18.74■□□□□ 0.59
GNE-202ENST00000396594 GSE1Q14687 1217 aa18.74■□□□□ 0.59
GNE-202ENST00000396594 ZNF530Q6P9A1 599 aaPredicted RBP18.74■□□□□ 0.59
GNE-202ENST00000396594 NOL8Q76FK4 1167 aaKnown RBP18.73■□□□□ 0.59
GNE-202ENST00000396594 ZSCAN31Q96LW9 406 aaPredicted RBP18.73■□□□□ 0.59
GNE-202ENST00000396594 CDKL5O76039 1030 aa18.73■□□□□ 0.59
GNE-202ENST00000396594 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
GNE-202ENST00000396594 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
GNE-202ENST00000396594 NEUROD6Q96NK8 337 aa18.73■□□□□ 0.59
GNE-202ENST00000396594 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
GNE-202ENST00000396594 ZNF652Q9Y2D9 606 aa18.72■□□□□ 0.59
GNE-202ENST00000396594 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
GNE-202ENST00000396594 DACH1Q9UI36 760 aa18.72■□□□□ 0.59
GNE-202ENST00000396594 SURF6O75683 361 aaKnown RBP18.72■□□□□ 0.59
GNE-202ENST00000396594 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 NSD3Q9BZ95 1437 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 PLIN1O60240 522 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 TTC39AQ5SRH9 613 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 ATF7IPQ6VMQ6 1270 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 RSPH6AQ9H0K4 717 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 MYO6Q9UM54 1294 aa18.71■□□□□ 0.59
GNE-202ENST00000396594 RPRD2Q5VT52 1461 aaKnown RBP18.7■□□□□ 0.58
GNE-202ENST00000396594 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
GNE-202ENST00000396594 EXOSC9Q06265 439 aaKnown RBP18.7■□□□□ 0.58
GNE-202ENST00000396594 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
GNE-202ENST00000396594 TEX13AQ9BXU3 409 aaPredicted RBP18.7■□□□□ 0.58
GNE-202ENST00000396594 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 ANKRD36BQ8N2N9 1353 aa18.69■□□□□ 0.58
GNE-202ENST00000396594 STARD3NLO95772 234 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 906.4 ms