RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
COL4A3-202ENST00000396578 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
COL4A3-202ENST00000396578 DACH1Q9UI36 760 aa16.63■□□□□ 0.25
COL4A3-202ENST00000396578 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
COL4A3-202ENST00000396578 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
COL4A3-202ENST00000396578 DEF6Q9H4E7 631 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 UQCRHP07919 91 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 STIM1Q13586 685 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
COL4A3-202ENST00000396578 CENPHQ9H3R5 247 aa16.62■□□□□ 0.25
COL4A3-202ENST00000396578 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 FIBPO43427 364 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 NEK4P51957 841 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
COL4A3-202ENST00000396578 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
COL4A3-202ENST00000396578 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
COL4A3-202ENST00000396578 EZRP15311 586 aaKnown RBP16.61■□□□□ 0.25
COL4A3-202ENST00000396578 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 TMEM132AQ24JP5 1023 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 GBP2P32456 591 aaPredicted RBP16.61■□□□□ 0.25
COL4A3-202ENST00000396578 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
COL4A3-202ENST00000396578 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
COL4A3-202ENST00000396578 STK38Q15208 465 aa16.6■□□□□ 0.25
COL4A3-202ENST00000396578 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
COL4A3-202ENST00000396578 RRP9O43818 475 aaKnown RBP16.59■□□□□ 0.25
COL4A3-202ENST00000396578 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
COL4A3-202ENST00000396578 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 PAF1Q8N7H5 531 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 CBFA2T2O43439 604 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 KDM4AO75164 1064 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
COL4A3-202ENST00000396578 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
COL4A3-202ENST00000396578 ANKRD1Q15327 319 aa16.58■□□□□ 0.25
COL4A3-202ENST00000396578 WIZO95785 1651 aa16.58■□□□□ 0.24
COL4A3-202ENST00000396578 PSME1Q06323 249 aa16.58■□□□□ 0.24
COL4A3-202ENST00000396578 TAX1BP1Q86VP1 789 aa16.58■□□□□ 0.24
COL4A3-202ENST00000396578 MTMR7Q9Y216 660 aa16.58■□□□□ 0.24
COL4A3-202ENST00000396578 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
COL4A3-202ENST00000396578 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
COL4A3-202ENST00000396578 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
COL4A3-202ENST00000396578 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
COL4A3-202ENST00000396578 FAM177A1Q8N128 213 aaPredicted RBP16.56■□□□□ 0.24
COL4A3-202ENST00000396578 FAM193AP78312 1265 aa16.56■□□□□ 0.24
COL4A3-202ENST00000396578 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
COL4A3-202ENST00000396578 HMOX1P09601 288 aa16.55■□□□□ 0.24
COL4A3-202ENST00000396578 ME1P48163 572 aa16.55■□□□□ 0.24
COL4A3-202ENST00000396578 ERC1Q8IUD2 1116 aa16.55■□□□□ 0.24
COL4A3-202ENST00000396578 GNAI3P08754 354 aa16.54■□□□□ 0.24
COL4A3-202ENST00000396578 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
COL4A3-202ENST00000396578 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
COL4A3-202ENST00000396578 KRT85P78386 507 aa16.54■□□□□ 0.24
COL4A3-202ENST00000396578 LRRFIP2Q9Y608 721 aaKnown RBP16.54■□□□□ 0.24
COL4A3-202ENST00000396578 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
COL4A3-202ENST00000396578 CUX1P39880 1505 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 ERICH4A6NGS2 130 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
COL4A3-202ENST00000396578 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 CYP46A1Q9Y6A2 500 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 CCDC102AQ96A19 550 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
COL4A3-202ENST00000396578 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
COL4A3-202ENST00000396578 IL27Q8NEV9 243 aa16.52■□□□□ 0.24
COL4A3-202ENST00000396578 TANGO6Q9C0B7 1094 aa16.52■□□□□ 0.24
COL4A3-202ENST00000396578 CCDC7Q96M83 1385 aa16.52■□□□□ 0.23
COL4A3-202ENST00000396578 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
COL4A3-202ENST00000396578 SURF6O75683 361 aaKnown RBP16.52■□□□□ 0.23
COL4A3-202ENST00000396578 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.23
COL4A3-202ENST00000396578 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
COL4A3-202ENST00000396578 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
COL4A3-202ENST00000396578 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
COL4A3-202ENST00000396578 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
COL4A3-202ENST00000396578 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
COL4A3-202ENST00000396578 GIMAP7Q8NHV1 300 aa16.5■□□□□ 0.23
COL4A3-202ENST00000396578 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL4A3-202ENST00000396578 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
COL4A3-202ENST00000396578 GNAI2P04899 355 aa16.5■□□□□ 0.23
COL4A3-202ENST00000396578 KIAA1328Q86T90 577 aa16.49■□□□□ 0.23
COL4A3-202ENST00000396578 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
COL4A3-202ENST00000396578 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
COL4A3-202ENST00000396578 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
COL4A3-202ENST00000396578 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
COL4A3-202ENST00000396578 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
COL4A3-202ENST00000396578 DESP17661 470 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 CCDC69A6NI79 296 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 SMTNL1A8MU46 457 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 SHTN1A0MZ66 631 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 CRACR2AQ9BSW2 395 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
COL4A3-202ENST00000396578 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
COL4A3-202ENST00000396578 STK3Q13188 491 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
COL4A3-202ENST00000396578 LARP1BQ659C4 914 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms