RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ESCO1Q5FWF5 840 aa20.85■□□□□ 0.93
VAMP1-202ENST00000396308 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
VAMP1-202ENST00000396308 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
VAMP1-202ENST00000396308 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
VAMP1-202ENST00000396308 TTC21AQ8NDW8 1320 aa20.83■□□□□ 0.93
VAMP1-202ENST00000396308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
VAMP1-202ENST00000396308 IQSEC2Q5JU85 1478 aa20.82■□□□□ 0.92
VAMP1-202ENST00000396308 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
VAMP1-202ENST00000396308 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
VAMP1-202ENST00000396308 USP54Q70EL1 1684 aa20.78■□□□□ 0.92
VAMP1-202ENST00000396308 PSME1Q06323 249 aa20.78■□□□□ 0.92
VAMP1-202ENST00000396308 GGNBP2Q9H3C7 697 aa20.78■□□□□ 0.92
VAMP1-202ENST00000396308 PIK3C2AO00443 1686 aa20.77■□□□□ 0.92
VAMP1-202ENST00000396308 FYB1O15117 783 aa20.77■□□□□ 0.92
VAMP1-202ENST00000396308 COG3Q96JB2 828 aa20.77■□□□□ 0.92
VAMP1-202ENST00000396308 PPP2R1AP30153 589 aa20.76■□□□□ 0.91
VAMP1-202ENST00000396308 SSH2Q76I76 1423 aa20.75■□□□□ 0.91
VAMP1-202ENST00000396308 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
VAMP1-202ENST00000396308 NME9Q86XW9 330 aa20.74■□□□□ 0.91
VAMP1-202ENST00000396308 ORAI2Q96SN7 254 aa20.74■□□□□ 0.91
VAMP1-202ENST00000396308 NPHP3Q7Z494 1330 aa20.74■□□□□ 0.91
VAMP1-202ENST00000396308 PAK3O75914 559 aaPredicted RBP20.73■□□□□ 0.91
VAMP1-202ENST00000396308 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
VAMP1-202ENST00000396308 MAP2P11137 1827 aaKnown RBP20.72■□□□□ 0.91
VAMP1-202ENST00000396308 TNNT2P45379 298 aaPredicted RBP20.72■□□□□ 0.91
VAMP1-202ENST00000396308 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
VAMP1-202ENST00000396308 OVOS2A0A0J9YW53 1432 aa20.71■□□□□ 0.91
VAMP1-202ENST00000396308 OVOS2Q6IE36 1432 aa20.71■□□□□ 0.91
VAMP1-202ENST00000396308 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
VAMP1-202ENST00000396308 FOXO3O43524 673 aa20.7■□□□□ 0.9
VAMP1-202ENST00000396308 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
VAMP1-202ENST00000396308 USP31Q70CQ4 1352 aa20.69■□□□□ 0.9
VAMP1-202ENST00000396308 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
VAMP1-202ENST00000396308 KRT28Q7Z3Y7 464 aa20.68■□□□□ 0.9
VAMP1-202ENST00000396308 ABTB2Q8N961 1025 aa20.68■□□□□ 0.9
VAMP1-202ENST00000396308 MARF1Q9Y4F3 1742 aaKnown RBP20.67■□□□□ 0.9
VAMP1-202ENST00000396308 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
VAMP1-202ENST00000396308 YTHDC1Q96MU7 727 aaKnown RBP20.66■□□□□ 0.9
VAMP1-202ENST00000396308 ROBO1Q9Y6N7 1651 aa20.66■□□□□ 0.9
VAMP1-202ENST00000396308 SBNO1A3KN83 1393 aa20.65■□□□□ 0.9
VAMP1-202ENST00000396308 NLRP6P59044 892 aa20.65■□□□□ 0.9
VAMP1-202ENST00000396308 WDR43Q15061 677 aaKnown RBP eCLIP20.65■□□□□ 0.9
VAMP1-202ENST00000396308 CCDC184Q52MB2 194 aa20.65■□□□□ 0.9
VAMP1-202ENST00000396308 BRINP3Q76B58 766 aa20.65■□□□□ 0.9
VAMP1-202ENST00000396308 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
VAMP1-202ENST00000396308 PXDNQ92626 1479 aa20.64■□□□□ 0.89
VAMP1-202ENST00000396308 CDK12Q9NYV4 1490 aaPredicted RBP20.63■□□□□ 0.89
VAMP1-202ENST00000396308 TNS3Q68CZ2 1445 aa20.63■□□□□ 0.89
VAMP1-202ENST00000396308 MTHFSP49914 203 aa20.63■□□□□ 0.89
VAMP1-202ENST00000396308 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
VAMP1-202ENST00000396308 SMG6Q86US8 1419 aaKnown RBP20.62■□□□□ 0.89
VAMP1-202ENST00000396308 LTN1O94822 1766 aa20.62■□□□□ 0.89
VAMP1-202ENST00000396308 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
VAMP1-202ENST00000396308 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
VAMP1-202ENST00000396308 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
VAMP1-202ENST00000396308 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
VAMP1-202ENST00000396308 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
VAMP1-202ENST00000396308 TOM1O60784 492 aa20.6■□□□□ 0.89
VAMP1-202ENST00000396308 PHRF1Q9P1Y6 1649 aaKnown RBP20.6■□□□□ 0.89
VAMP1-202ENST00000396308 KCNH5Q8NCM2 988 aa20.59■□□□□ 0.89
VAMP1-202ENST00000396308 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
VAMP1-202ENST00000396308 AHDC1Q5TGY3 1603 aaPredicted RBP20.59■□□□□ 0.89
VAMP1-202ENST00000396308 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
VAMP1-202ENST00000396308 SLIT3O75094 1523 aa20.58■□□□□ 0.89
VAMP1-202ENST00000396308 PPM1GO15355 546 aaPredicted RBP20.58■□□□□ 0.89
VAMP1-202ENST00000396308 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
VAMP1-202ENST00000396308 NUDCQ9Y266 331 aa20.58■□□□□ 0.89
VAMP1-202ENST00000396308 INSRP06213 1382 aa20.57■□□□□ 0.88
VAMP1-202ENST00000396308 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
VAMP1-202ENST00000396308 SOX12O15370 315 aa20.56■□□□□ 0.88
VAMP1-202ENST00000396308 KIF24Q5T7B8 1368 aa20.56■□□□□ 0.88
VAMP1-202ENST00000396308 NFAT5O94916 1531 aa20.55■□□□□ 0.88
VAMP1-202ENST00000396308 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
VAMP1-202ENST00000396308 COL3A1P02461 1466 aaPredicted RBP20.55■□□□□ 0.88
VAMP1-202ENST00000396308 SOS2Q07890 1332 aaPredicted RBP20.54■□□□□ 0.88
VAMP1-202ENST00000396308 SPATA31A3Q5VYP0 1347 aa20.54■□□□□ 0.88
VAMP1-202ENST00000396308 CRYBG1Q9Y4K1 1723 aa20.54■□□□□ 0.88
VAMP1-202ENST00000396308 DDX17Q92841 729 aaKnown RBP20.54■□□□□ 0.88
VAMP1-202ENST00000396308 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
VAMP1-202ENST00000396308 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
VAMP1-202ENST00000396308 DIAPH1O60610 1272 aaKnown RBP20.53■□□□□ 0.88
VAMP1-202ENST00000396308 RRS1Q15050 365 aaKnown RBP20.53■□□□□ 0.88
VAMP1-202ENST00000396308 FLT4P35916 1363 aa20.53■□□□□ 0.88
VAMP1-202ENST00000396308 USP19O94966 1318 aa20.53■□□□□ 0.88
VAMP1-202ENST00000396308 PNPLA6Q8IY17 1366 aa20.52■□□□□ 0.88
VAMP1-202ENST00000396308 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
VAMP1-202ENST00000396308 AMPHP49418 695 aa20.52■□□□□ 0.88
VAMP1-202ENST00000396308 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
VAMP1-202ENST00000396308 ABCA3Q99758 1704 aa20.52■□□□□ 0.88
VAMP1-202ENST00000396308 HNRNPUQ00839 825 aaKnown RBP eCLIP20.51■□□□□ 0.87
VAMP1-202ENST00000396308 BLMP54132 1417 aaPredicted RBP20.51■□□□□ 0.87
VAMP1-202ENST00000396308 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
VAMP1-202ENST00000396308 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
VAMP1-202ENST00000396308 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
VAMP1-202ENST00000396308 PNNQ9H307 717 aaKnown RBP20.48■□□□□ 0.87
VAMP1-202ENST00000396308 ABCC6O95255 1503 aa20.48■□□□□ 0.87
VAMP1-202ENST00000396308 GCP02774 474 aa20.47■□□□□ 0.87
VAMP1-202ENST00000396308 PIP4K2BP78356 416 aa20.47■□□□□ 0.87
VAMP1-202ENST00000396308 COL16A1Q07092 1604 aaPredicted RBP20.46■□□□□ 0.87
VAMP1-202ENST00000396308 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms