RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 SLKQ9H2G2 1235 aaPredicted RBP18■□□□□ 0.47
CCHCR1-203ENST00000396268 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
CCHCR1-203ENST00000396268 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
CCHCR1-203ENST00000396268 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
CCHCR1-203ENST00000396268 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 UBE2Q2Q8WVN8 375 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 POLR3AO14802 1390 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 ADAMTS13Q76LX8 1427 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
CCHCR1-203ENST00000396268 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.47
CCHCR1-203ENST00000396268 SEC24BO95487 1268 aa17.96■□□□□ 0.47
CCHCR1-203ENST00000396268 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
CCHCR1-203ENST00000396268 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 MTHFSP49914 203 aa17.94■□□□□ 0.46
CCHCR1-203ENST00000396268 CABP1Q9NZU7 370 aa17.93■□□□□ 0.46
CCHCR1-203ENST00000396268 ROBO2Q9HCK4 1378 aa17.93■□□□□ 0.46
CCHCR1-203ENST00000396268 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 USP19O94966 1318 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 RLBP1P12271 317 aa17.92■□□□□ 0.46
CCHCR1-203ENST00000396268 NUTM2FA1L443 756 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 PCDHB15Q9Y5E8 787 aa17.91■□□□□ 0.46
CCHCR1-203ENST00000396268 BECN1Q14457 450 aa17.9■□□□□ 0.46
CCHCR1-203ENST00000396268 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 ANKRD36BQ8N2N9 1353 aa17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 CD163L1Q9NR16 1453 aa17.89■□□□□ 0.45
CCHCR1-203ENST00000396268 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 ARHGAP23Q9P227 1491 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
CCHCR1-203ENST00000396268 SLIT1O75093 1534 aa17.87■□□□□ 0.45
CCHCR1-203ENST00000396268 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
CCHCR1-203ENST00000396268 WASLO00401 505 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
CCHCR1-203ENST00000396268 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RRAGDQ9NQL2 400 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FBLN1P23142 703 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 MED14O60244 1454 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 ATAD2Q6PL18 1390 aa17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCHCR1-203ENST00000396268 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.45
CCHCR1-203ENST00000396268 TECPR2O15040 1411 aa17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
CCHCR1-203ENST00000396268 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 FYB1O15117 783 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 AAMPQ13685 434 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
CCHCR1-203ENST00000396268 CPS1P31327 1500 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
CCHCR1-203ENST00000396268 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
CCHCR1-203ENST00000396268 KCNA6P17658 529 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 IQSEC2Q5JU85 1478 aa17.79■□□□□ 0.44
CCHCR1-203ENST00000396268 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 TBC1D32Q96NH3 1257 aa17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 NAP1L5Q96NT1 182 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-203ENST00000396268 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
CCHCR1-203ENST00000396268 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 USP32Q8NFA0 1604 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
CCHCR1-203ENST00000396268 NME9Q86XW9 330 aa17.75■□□□□ 0.43
CCHCR1-203ENST00000396268 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
CCHCR1-203ENST00000396268 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms