RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
LMO3-205ENST00000396205 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
LMO3-205ENST00000396205 RGS12O14924 1447 aa9.48□□□□□ -0.89
LMO3-205ENST00000396205 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
LMO3-205ENST00000396205 KRT28Q7Z3Y7 464 aa9.47□□□□□ -0.89
LMO3-205ENST00000396205 RGPD1P0DJD0 1748 aa9.47□□□□□ -0.89
LMO3-205ENST00000396205 KIF20BQ96Q89 1820 aa9.47□□□□□ -0.89
LMO3-205ENST00000396205 EVC2Q86UK5 1308 aa9.47□□□□□ -0.89
LMO3-205ENST00000396205 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.89
LMO3-205ENST00000396205 CAMTA1Q9Y6Y1 1673 aa9.46□□□□□ -0.89
LMO3-205ENST00000396205 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.89
LMO3-205ENST00000396205 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
LMO3-205ENST00000396205 POTEAQ6S8J7 498 aa9.46□□□□□ -0.9
LMO3-205ENST00000396205 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
LMO3-205ENST00000396205 KDM2AQ9Y2K7 1162 aa9.45□□□□□ -0.9
LMO3-205ENST00000396205 AFF2P51816 1311 aa9.45□□□□□ -0.9
LMO3-205ENST00000396205 TTC21AQ8NDW8 1320 aa9.45□□□□□ -0.9
LMO3-205ENST00000396205 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
LMO3-205ENST00000396205 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
LMO3-205ENST00000396205 NBPF8Q3BBV2 869 aa9.44□□□□□ -0.9
LMO3-205ENST00000396205 PEAK1Q9H792 1746 aa9.44□□□□□ -0.9
LMO3-205ENST00000396205 TRPC5Q9UL62 973 aaPredicted RBP9.44□□□□□ -0.9
LMO3-205ENST00000396205 LTN1O94822 1766 aa9.44□□□□□ -0.9
LMO3-205ENST00000396205 TNS1Q9HBL0 1735 aaKnown RBP9.44□□□□□ -0.9
LMO3-205ENST00000396205 EDC4Q6P2E9 1401 aaKnown RBP9.44□□□□□ -0.9
LMO3-205ENST00000396205 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
LMO3-205ENST00000396205 FOXO3O43524 673 aa9.43□□□□□ -0.9
LMO3-205ENST00000396205 PELP1Q8IZL8 1130 aaKnown RBP9.43□□□□□ -0.9
LMO3-205ENST00000396205 SIN3AQ96ST3 1273 aa9.43□□□□□ -0.9
LMO3-205ENST00000396205 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
LMO3-205ENST00000396205 VPS72Q15906 364 aa9.43□□□□□ -0.9
LMO3-205ENST00000396205 BCL9O00512 1426 aa9.42□□□□□ -0.9
LMO3-205ENST00000396205 MYT1Q01538 1121 aa9.42□□□□□ -0.9
LMO3-205ENST00000396205 MEX3CQ5U5Q3 659 aaKnown RBP9.42□□□□□ -0.9
LMO3-205ENST00000396205 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
LMO3-205ENST00000396205 UNC5CLQ8IV45 518 aa9.42□□□□□ -0.9
LMO3-205ENST00000396205 DDX17Q92841 729 aaKnown RBP9.42□□□□□ -0.9
LMO3-205ENST00000396205 NGLY1Q96IV0 654 aa9.42□□□□□ -0.9
LMO3-205ENST00000396205 ACEP12821 1306 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 OVOS2A0A0J9YW53 1432 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 DISP2A7MBM2 1401 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 OVOS2Q6IE36 1432 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 RXRBP28702 533 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 SENP3Q9H4L4 574 aaPredicted RBP9.41□□□□□ -0.9
LMO3-205ENST00000396205 RREB1Q92766 1687 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 TESK2Q96S53 571 aa9.41□□□□□ -0.9
LMO3-205ENST00000396205 AATKQ6ZMQ8 1374 aa9.4□□□□□ -0.9
LMO3-205ENST00000396205 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
LMO3-205ENST00000396205 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
LMO3-205ENST00000396205 USP21Q9UK80 565 aa9.39□□□□□ -0.91
LMO3-205ENST00000396205 KIF24Q5T7B8 1368 aa9.39□□□□□ -0.91
LMO3-205ENST00000396205 ANKRD36BQ8N2N9 1353 aa9.38□□□□□ -0.91
LMO3-205ENST00000396205 RGPD5Q99666 1765 aa9.38□□□□□ -0.91
LMO3-205ENST00000396205 C11orf95C9JLR9 678 aaPredicted RBP9.38□□□□□ -0.91
LMO3-205ENST00000396205 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
LMO3-205ENST00000396205 CARD11Q9BXL7 1154 aa9.38□□□□□ -0.91
LMO3-205ENST00000396205 THRAP3Q9Y2W1 955 aaKnown RBP9.38□□□□□ -0.91
LMO3-205ENST00000396205 SBF2Q86WG5 1849 aa9.38□□□□□ -0.91
LMO3-205ENST00000396205 USP47Q96K76 1375 aa9.37□□□□□ -0.91
LMO3-205ENST00000396205 BLMP54132 1417 aaPredicted RBP9.37□□□□□ -0.91
LMO3-205ENST00000396205 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
LMO3-205ENST00000396205 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
LMO3-205ENST00000396205 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 C8orf37Q96NL8 207 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 RTL1A6NKG5 1358 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 SPATA31A5Q5VU36 1347 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 SPATA31A7Q8IWB4 1347 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 HIRIP3Q9BW71 556 aaPredicted RBP9.36□□□□□ -0.91
LMO3-205ENST00000396205 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 NLRP13Q86W25 1043 aa9.36□□□□□ -0.91
LMO3-205ENST00000396205 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 LRP5O75197 1615 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 CRB1P82279 1406 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 TTC21BQ7Z4L5 1316 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
LMO3-205ENST00000396205 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 PMFBP1Q8TBY8 1022 aa9.35□□□□□ -0.91
LMO3-205ENST00000396205 NHSQ6T4R5 1651 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 A0A1W2PP64 1363 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 KTN1Q86UP2 1357 aaKnown RBP9.34□□□□□ -0.91
LMO3-205ENST00000396205 SHANK3Q9BYB0 1731 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 SRPK2P78362 688 aaKnown RBP9.34□□□□□ -0.91
LMO3-205ENST00000396205 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 FAM83GA6ND36 823 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
LMO3-205ENST00000396205 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
LMO3-205ENST00000396205 NEUROD1Q13562 356 aa9.34□□□□□ -0.91
LMO3-205ENST00000396205 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
LMO3-205ENST00000396205 SMG6Q86US8 1419 aaKnown RBP9.33□□□□□ -0.92
LMO3-205ENST00000396205 PKD1L3Q7Z443 1732 aa9.33□□□□□ -0.92
LMO3-205ENST00000396205 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
LMO3-205ENST00000396205 SPATA31A1Q5TZJ5 1347 aa9.33□□□□□ -0.92
LMO3-205ENST00000396205 PARD3Q8TEW0 1356 aa9.33□□□□□ -0.92
LMO3-205ENST00000396205 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
LMO3-205ENST00000396205 UPF1Q92900 1129 aaKnown RBP eCLIP9.32□□□□□ -0.92
LMO3-205ENST00000396205 TERF2IPQ9NYB0 399 aa9.32□□□□□ -0.92
LMO3-205ENST00000396205 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
LMO3-205ENST00000396205 NSD2O96028 1365 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms