RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 PLEKHO1Q53GL0 409 aaPredicted RBP15.78■□□□□ 0.12
GREB1-206ENST00000396123 SYTL4Q96C24 671 aaPredicted RBP15.78■□□□□ 0.12
GREB1-206ENST00000396123 NASPP49321 788 aaPredicted RBP15.77■□□□□ 0.12
GREB1-206ENST00000396123 CCDC73Q6ZRK6 1079 aa15.77■□□□□ 0.11
GREB1-206ENST00000396123 FCHSD2O94868 740 aa15.77■□□□□ 0.11
GREB1-206ENST00000396123 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.11
GREB1-206ENST00000396123 ZNF428Q96B54 188 aa15.77■□□□□ 0.11
GREB1-206ENST00000396123 FSD1Q9BTV5 496 aa15.77■□□□□ 0.11
GREB1-206ENST00000396123 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.11
GREB1-206ENST00000396123 CCT4P50991 539 aaKnown RBP15.76■□□□□ 0.11
GREB1-206ENST00000396123 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
GREB1-206ENST00000396123 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
GREB1-206ENST00000396123 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
GREB1-206ENST00000396123 RALYLQ86SE5 291 aaKnown RBP15.76■□□□□ 0.11
GREB1-206ENST00000396123 RAPGEF3O95398 923 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 MBD3O95983 291 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 MSH5O43196 834 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 HDGFL1Q5TGJ6 251 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 AMOTL1Q8IY63 956 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 ZNF592Q92610 1267 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 HOOK1Q9UJC3 728 aaKnown RBP15.75■□□□□ 0.11
GREB1-206ENST00000396123 CHD1LQ86WJ1 897 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 NCOA1Q15788 1441 aa15.75■□□□□ 0.11
GREB1-206ENST00000396123 VPS37DQ86XT2 251 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
GREB1-206ENST00000396123 WASHC4Q2M389 1173 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 TMPOP42166 694 aaKnown RBP15.74■□□□□ 0.11
GREB1-206ENST00000396123 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
GREB1-206ENST00000396123 PLB1Q6P1J6 1458 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 ERICH2A1L162 156 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 ESCO1Q5FWF5 840 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
GREB1-206ENST00000396123 TPM2P07951 284 aa15.73■□□□□ 0.11
GREB1-206ENST00000396123 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
GREB1-206ENST00000396123 HIP1O00291 1037 aa15.73■□□□□ 0.11
GREB1-206ENST00000396123 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
GREB1-206ENST00000396123 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
GREB1-206ENST00000396123 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
GREB1-206ENST00000396123 FOSBP53539 338 aa15.72■□□□□ 0.11
GREB1-206ENST00000396123 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
GREB1-206ENST00000396123 SAFBQ15424 915 aaKnown RBP eCLIP15.72■□□□□ 0.11
GREB1-206ENST00000396123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.72■□□□□ 0.11
GREB1-206ENST00000396123 PRPF40AO75400 957 aaKnown RBP15.72■□□□□ 0.11
GREB1-206ENST00000396123 RNF214Q8ND24 703 aa15.72■□□□□ 0.11
GREB1-206ENST00000396123 NFE2L2Q16236 605 aa15.71■□□□□ 0.11
GREB1-206ENST00000396123 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
GREB1-206ENST00000396123 ANKRD20A12PQ8NF67 263 aa15.71■□□□□ 0.11
GREB1-206ENST00000396123 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
GREB1-206ENST00000396123 PDCP20941 246 aa15.71■□□□□ 0.11
GREB1-206ENST00000396123 THEMISQ8N1K5 641 aaPredicted RBP15.71■□□□□ 0.11
GREB1-206ENST00000396123 K7ELQ4 463 aaPredicted RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
GREB1-206ENST00000396123 CCDC39Q9UFE4 941 aa15.7■□□□□ 0.1
GREB1-206ENST00000396123 RRS1Q15050 365 aaKnown RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 FAM13BQ9NYF5 915 aa15.7■□□□□ 0.1
GREB1-206ENST00000396123 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 LETM1O95202 739 aaPredicted RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 MEX3CQ5U5Q3 659 aaKnown RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
GREB1-206ENST00000396123 HOMER1Q86YM7 354 aa15.69■□□□□ 0.1
GREB1-206ENST00000396123 CCDC27Q2M243 656 aa15.69■□□□□ 0.1
GREB1-206ENST00000396123 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
GREB1-206ENST00000396123 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
GREB1-206ENST00000396123 TNNT3P45378 269 aaPredicted RBP15.68■□□□□ 0.1
GREB1-206ENST00000396123 RPAP2Q8IXW5 612 aaPredicted RBP15.68■□□□□ 0.1
GREB1-206ENST00000396123 IPO7O95373 1038 aaKnown RBP15.68■□□□□ 0.1
GREB1-206ENST00000396123 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
GREB1-206ENST00000396123 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
GREB1-206ENST00000396123 FBXW7Q969H0 707 aa15.68■□□□□ 0.1
GREB1-206ENST00000396123 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
GREB1-206ENST00000396123 SDF4Q9BRK5 362 aa15.68■□□□□ 0.1
GREB1-206ENST00000396123 RARSP54136 660 aaKnown RBP15.67■□□□□ 0.1
GREB1-206ENST00000396123 C20orf194Q5TEA3 1177 aa15.67■□□□□ 0.1
GREB1-206ENST00000396123 CEP89Q96ST8 783 aa15.67■□□□□ 0.1
GREB1-206ENST00000396123 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
GREB1-206ENST00000396123 KIF14Q15058 1648 aa15.67■□□□□ 0.1
GREB1-206ENST00000396123 ZNF530Q6P9A1 599 aaPredicted RBP15.67■□□□□ 0.1
GREB1-206ENST00000396123 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
GREB1-206ENST00000396123 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
GREB1-206ENST00000396123 NAT10Q9H0A0 1025 aaKnown RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 TATP17735 454 aaPredicted RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 PROSER2Q86WR7 435 aaPredicted RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 NKTRP30414 1462 aaKnown RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 NUDT16Q96DE0 195 aaKnown RBP15.66■□□□□ 0.1
GREB1-206ENST00000396123 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
GREB1-206ENST00000396123 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
GREB1-206ENST00000396123 GPS2Q13227 327 aa15.65■□□□□ 0.1
GREB1-206ENST00000396123 AEBP2Q6ZN18 517 aaPredicted RBP15.65■□□□□ 0.1
GREB1-206ENST00000396123 DHX16O60231 1041 aaKnown RBP15.65■□□□□ 0.1
GREB1-206ENST00000396123 PCMTD1Q96MG8 357 aaPredicted RBP15.65■□□□□ 0.1
GREB1-206ENST00000396123 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
GREB1-206ENST00000396123 FIBPO43427 364 aa15.65■□□□□ 0.1
GREB1-206ENST00000396123 CYP46A1Q9Y6A2 500 aa15.65■□□□□ 0.1
GREB1-206ENST00000396123 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
GREB1-206ENST00000396123 TBC1D2BQ9UPU7 963 aa15.64■□□□□ 0.09
GREB1-206ENST00000396123 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
GREB1-206ENST00000396123 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
GREB1-206ENST00000396123 CCDC173Q0VFZ6 552 aa15.64■□□□□ 0.09
GREB1-206ENST00000396123 MCM4P33991 863 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms