RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
CCR9-203ENST00000395963 NPHP3Q7Z494 1330 aa12.01□□□□□ -0.49
CCR9-203ENST00000395963 AHDC1Q5TGY3 1603 aaPredicted RBP12.01□□□□□ -0.49
CCR9-203ENST00000395963 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
CCR9-203ENST00000395963 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
CCR9-203ENST00000395963 PSME1Q06323 249 aa12□□□□□ -0.49
CCR9-203ENST00000395963 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
CCR9-203ENST00000395963 MED1Q15648 1581 aaPredicted RBP11.99□□□□□ -0.49
CCR9-203ENST00000395963 TTC21BQ7Z4L5 1316 aa11.99□□□□□ -0.49
CCR9-203ENST00000395963 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
CCR9-203ENST00000395963 OVOS2A0A0J9YW53 1432 aa11.99□□□□□ -0.49
CCR9-203ENST00000395963 OVOS2Q6IE36 1432 aa11.99□□□□□ -0.49
CCR9-203ENST00000395963 ESCO1Q5FWF5 840 aa11.98□□□□□ -0.49
CCR9-203ENST00000395963 SLAIN2Q9P270 581 aa11.98□□□□□ -0.49
CCR9-203ENST00000395963 KIF24Q5T7B8 1368 aa11.98□□□□□ -0.49
CCR9-203ENST00000395963 ALS2Q96Q42 1657 aa11.98□□□□□ -0.49
CCR9-203ENST00000395963 PXDNQ92626 1479 aa11.97□□□□□ -0.49
CCR9-203ENST00000395963 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
CCR9-203ENST00000395963 ABCC6O95255 1503 aa11.97□□□□□ -0.49
CCR9-203ENST00000395963 SMG6Q86US8 1419 aaKnown RBP11.97□□□□□ -0.49
CCR9-203ENST00000395963 INSRP06213 1382 aa11.97□□□□□ -0.49
CCR9-203ENST00000395963 TOM1O60784 492 aa11.97□□□□□ -0.49
CCR9-203ENST00000395963 ARHGEF10O15013 1369 aa11.96□□□□□ -0.49
CCR9-203ENST00000395963 NLRP13Q86W25 1043 aa11.96□□□□□ -0.49
CCR9-203ENST00000395963 PHRF1Q9P1Y6 1649 aaKnown RBP11.96□□□□□ -0.5
CCR9-203ENST00000395963 FYB1O15117 783 aa11.95□□□□□ -0.5
CCR9-203ENST00000395963 SLIT3O75094 1523 aa11.95□□□□□ -0.5
CCR9-203ENST00000395963 TNS3Q68CZ2 1445 aa11.95□□□□□ -0.5
CCR9-203ENST00000395963 BRINP3Q76B58 766 aa11.95□□□□□ -0.5
CCR9-203ENST00000395963 ROBO1Q9Y6N7 1651 aa11.95□□□□□ -0.5
CCR9-203ENST00000395963 SOS2Q07890 1332 aaPredicted RBP11.94□□□□□ -0.5
CCR9-203ENST00000395963 COG3Q96JB2 828 aa11.94□□□□□ -0.5
CCR9-203ENST00000395963 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
CCR9-203ENST00000395963 MORC1Q86VD1 984 aa11.93□□□□□ -0.5
CCR9-203ENST00000395963 PMFBP1Q8TBY8 1022 aa11.93□□□□□ -0.5
CCR9-203ENST00000395963 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
CCR9-203ENST00000395963 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
CCR9-203ENST00000395963 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
CCR9-203ENST00000395963 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
CCR9-203ENST00000395963 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
CCR9-203ENST00000395963 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
CCR9-203ENST00000395963 USP19O94966 1318 aa11.92□□□□□ -0.5
CCR9-203ENST00000395963 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
CCR9-203ENST00000395963 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
CCR9-203ENST00000395963 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
CCR9-203ENST00000395963 CRYBG1Q9Y4K1 1723 aa11.91□□□□□ -0.5
CCR9-203ENST00000395963 CC2D1BQ5T0F9 858 aaKnown RBP11.91□□□□□ -0.5
CCR9-203ENST00000395963 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.5
CCR9-203ENST00000395963 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
CCR9-203ENST00000395963 MIER1Q8N108 512 aa11.9□□□□□ -0.5
CCR9-203ENST00000395963 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
CCR9-203ENST00000395963 NFAT5O94916 1531 aa11.89□□□□□ -0.51
CCR9-203ENST00000395963 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
CCR9-203ENST00000395963 FOXO3O43524 673 aa11.89□□□□□ -0.51
CCR9-203ENST00000395963 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
CCR9-203ENST00000395963 NME9Q86XW9 330 aa11.88□□□□□ -0.51
CCR9-203ENST00000395963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCR9-203ENST00000395963 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
CCR9-203ENST00000395963 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
CCR9-203ENST00000395963 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
CCR9-203ENST00000395963 LRRC59Q96AG4 307 aaKnown RBP11.87□□□□□ -0.51
CCR9-203ENST00000395963 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
CCR9-203ENST00000395963 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
CCR9-203ENST00000395963 CPDO75976 1380 aa11.86□□□□□ -0.51
CCR9-203ENST00000395963 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
CCR9-203ENST00000395963 NLRP6P59044 892 aa11.86□□□□□ -0.51
CCR9-203ENST00000395963 COL3A1P02461 1466 aaPredicted RBP11.85□□□□□ -0.51
CCR9-203ENST00000395963 FLT4P35916 1363 aa11.85□□□□□ -0.51
CCR9-203ENST00000395963 PRKCSHP14314 528 aaPredicted RBP11.85□□□□□ -0.51
CCR9-203ENST00000395963 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
CCR9-203ENST00000395963 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
CCR9-203ENST00000395963 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
CCR9-203ENST00000395963 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
CCR9-203ENST00000395963 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
CCR9-203ENST00000395963 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
CCR9-203ENST00000395963 LTN1O94822 1766 aa11.83□□□□□ -0.52
CCR9-203ENST00000395963 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
CCR9-203ENST00000395963 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
CCR9-203ENST00000395963 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
CCR9-203ENST00000395963 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
CCR9-203ENST00000395963 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
CCR9-203ENST00000395963 MTHFSP49914 203 aa11.81□□□□□ -0.52
CCR9-203ENST00000395963 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
CCR9-203ENST00000395963 PNISRQ8TF01 805 aaKnown RBP11.81□□□□□ -0.52
CCR9-203ENST00000395963 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
CCR9-203ENST00000395963 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
CCR9-203ENST00000395963 GCP02774 474 aa11.8□□□□□ -0.52
CCR9-203ENST00000395963 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
CCR9-203ENST00000395963 JCADQ9P266 1359 aa11.8□□□□□ -0.52
CCR9-203ENST00000395963 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
CCR9-203ENST00000395963 RGPD1P0DJD0 1748 aa11.79□□□□□ -0.52
CCR9-203ENST00000395963 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
CCR9-203ENST00000395963 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
CCR9-203ENST00000395963 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
CCR9-203ENST00000395963 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCR9-203ENST00000395963 IP6K1Q92551 441 aa11.79□□□□□ -0.52
CCR9-203ENST00000395963 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
CCR9-203ENST00000395963 COL18A1P39060 1754 aa11.78□□□□□ -0.52
CCR9-203ENST00000395963 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
CCR9-203ENST00000395963 SPATA31A6Q5VVP1 1343 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms