RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
XCR1-202ENST00000395946 PMFBP1Q8TBY8 1022 aa10.24□□□□□ -0.77
XCR1-202ENST00000395946 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
XCR1-202ENST00000395946 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
XCR1-202ENST00000395946 SRCAPQ6ZRS2 3230 aa10.24□□□□□ -0.77
XCR1-202ENST00000395946 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
XCR1-202ENST00000395946 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 THSD7AQ9UPZ6 1657 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 HOXD11P31277 338 aaPredicted RBP10.23□□□□□ -0.77
XCR1-202ENST00000395946 SAFB2Q14151 953 aaKnown RBP eCLIP10.23□□□□□ -0.77
XCR1-202ENST00000395946 NGDNQ8NEJ9 315 aaKnown RBP10.23□□□□□ -0.77
XCR1-202ENST00000395946 BTG4Q9NY30 223 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 TRAK1Q9UPV9 953 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 RGPD1P0DJD0 1748 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 CRYBG1Q9Y4K1 1723 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 PRR36Q9H6K5 1346 aa10.23□□□□□ -0.77
XCR1-202ENST00000395946 POLR3AO14802 1390 aaPredicted RBP10.23□□□□□ -0.77
XCR1-202ENST00000395946 BRD4O60885 1362 aaPredicted RBP10.23□□□□□ -0.77
XCR1-202ENST00000395946 KCNA4P22459 653 aa10.22□□□□□ -0.77
XCR1-202ENST00000395946 DEFB132Q7Z7B7 95 aa10.22□□□□□ -0.77
XCR1-202ENST00000395946 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
XCR1-202ENST00000395946 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.77
XCR1-202ENST00000395946 KIAA1210Q9ULL0 1709 aa10.21□□□□□ -0.77
XCR1-202ENST00000395946 A0A0G2JS52 829 aa10.21□□□□□ -0.77
XCR1-202ENST00000395946 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.77
XCR1-202ENST00000395946 MYT1Q01538 1121 aa10.21□□□□□ -0.77
XCR1-202ENST00000395946 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.77
XCR1-202ENST00000395946 MINK1Q8N4C8 1332 aaPredicted RBP10.21□□□□□ -0.78
XCR1-202ENST00000395946 CPDO75976 1380 aa10.2□□□□□ -0.78
XCR1-202ENST00000395946 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
XCR1-202ENST00000395946 TOPAZ1Q8N9V7 1692 aa10.19□□□□□ -0.78
XCR1-202ENST00000395946 PHRF1Q9P1Y6 1649 aaKnown RBP10.19□□□□□ -0.78
XCR1-202ENST00000395946 SPATA31A1Q5TZJ5 1347 aa10.19□□□□□ -0.78
XCR1-202ENST00000395946 NUDT16Q96DE0 195 aaKnown RBP10.19□□□□□ -0.78
XCR1-202ENST00000395946 HIRIP3Q9BW71 556 aaPredicted RBP10.19□□□□□ -0.78
XCR1-202ENST00000395946 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
XCR1-202ENST00000395946 KIAA0232Q92628 1395 aa10.18□□□□□ -0.78
XCR1-202ENST00000395946 PLEKHG3A1L390 1219 aa10.18□□□□□ -0.78
XCR1-202ENST00000395946 NPM3O75607 178 aaKnown RBP10.18□□□□□ -0.78
XCR1-202ENST00000395946 PAK3O75914 559 aaPredicted RBP10.18□□□□□ -0.78
XCR1-202ENST00000395946 FAM196AQ6ZSG2 479 aa10.18□□□□□ -0.78
XCR1-202ENST00000395946 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
XCR1-202ENST00000395946 THRAP3Q9Y2W1 955 aaKnown RBP10.18□□□□□ -0.78
XCR1-202ENST00000395946 USP19O94966 1318 aa10.17□□□□□ -0.78
XCR1-202ENST00000395946 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
XCR1-202ENST00000395946 SSH2Q76I76 1423 aa10.16□□□□□ -0.78
XCR1-202ENST00000395946 TNS1Q9HBL0 1735 aaKnown RBP10.16□□□□□ -0.78
XCR1-202ENST00000395946 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
XCR1-202ENST00000395946 ACEP12821 1306 aa10.15□□□□□ -0.78
XCR1-202ENST00000395946 CDK19Q9BWU1 502 aa10.15□□□□□ -0.78
XCR1-202ENST00000395946 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.79
XCR1-202ENST00000395946 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
XCR1-202ENST00000395946 NLRP13Q86W25 1043 aa10.14□□□□□ -0.79
XCR1-202ENST00000395946 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
XCR1-202ENST00000395946 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
XCR1-202ENST00000395946 TCP11L2Q8N4U5 519 aa10.13□□□□□ -0.79
XCR1-202ENST00000395946 CENPJQ9HC77 1338 aaPredicted RBP10.12□□□□□ -0.79
XCR1-202ENST00000395946 EVA1CP58658 441 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 PDE3BQ13370 1112 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 CAMKK2Q96RR4 588 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 SLIT3O75094 1523 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
XCR1-202ENST00000395946 COL5A2P05997 1499 aaPredicted RBP10.11□□□□□ -0.79
XCR1-202ENST00000395946 PARP4Q9UKK3 1724 aaKnown RBP10.11□□□□□ -0.79
XCR1-202ENST00000395946 USP6P35125 1406 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 CRB1P82279 1406 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
XCR1-202ENST00000395946 STRN4Q9NRL3 753 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 RREB1Q92766 1687 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 AATKQ6ZMQ8 1374 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
XCR1-202ENST00000395946 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
XCR1-202ENST00000395946 OVOS2A0A0G2JMS6 1433 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 OVOS2A0A0J9YW53 1432 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 BCL9O00512 1426 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 OVOS2Q6IE36 1432 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
XCR1-202ENST00000395946 GCP02774 474 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 SRPK2P78362 688 aaKnown RBP10.1□□□□□ -0.79
XCR1-202ENST00000395946 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
XCR1-202ENST00000395946 CHRNA2Q15822 529 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 NBPF14Q5TI25 921 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
XCR1-202ENST00000395946 ABCC6O95255 1503 aa10.1□□□□□ -0.79
XCR1-202ENST00000395946 TRIM37O94972 964 aa10.09□□□□□ -0.79
XCR1-202ENST00000395946 APBA3O96018 575 aa10.09□□□□□ -0.79
XCR1-202ENST00000395946 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
XCR1-202ENST00000395946 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
XCR1-202ENST00000395946 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
XCR1-202ENST00000395946 QRICH2Q9H0J4 1663 aa10.08□□□□□ -0.8
XCR1-202ENST00000395946 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
XCR1-202ENST00000395946 PLSCR1O15162 318 aa10.07□□□□□ -0.8
XCR1-202ENST00000395946 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
XCR1-202ENST00000395946 KCNH5Q8NCM2 988 aa10.07□□□□□ -0.8
XCR1-202ENST00000395946 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
XCR1-202ENST00000395946 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms