RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.51
RAE1-202ENST00000395840 AAMPQ13685 434 aa11.83□□□□□ -0.52
RAE1-202ENST00000395840 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAE1-202ENST00000395840 C1orf167Q5SNV9 1468 aa11.83□□□□□ -0.52
RAE1-202ENST00000395840 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
RAE1-202ENST00000395840 EIF4G2P78344 907 aaKnown RBP eCLIP11.82□□□□□ -0.52
RAE1-202ENST00000395840 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
RAE1-202ENST00000395840 TULP4Q9NRJ4 1543 aa11.82□□□□□ -0.52
RAE1-202ENST00000395840 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
RAE1-202ENST00000395840 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
RAE1-202ENST00000395840 FGD1P98174 961 aa11.82□□□□□ -0.52
RAE1-202ENST00000395840 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
RAE1-202ENST00000395840 RNF123Q5XPI4 1314 aa11.81□□□□□ -0.52
RAE1-202ENST00000395840 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
RAE1-202ENST00000395840 CDK19Q9BWU1 502 aa11.81□□□□□ -0.52
RAE1-202ENST00000395840 ITSN1Q15811 1721 aa11.8□□□□□ -0.52
RAE1-202ENST00000395840 ROBO1Q9Y6N7 1651 aa11.8□□□□□ -0.52
RAE1-202ENST00000395840 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
RAE1-202ENST00000395840 FRAT2O75474 233 aaPredicted RBP11.8□□□□□ -0.52
RAE1-202ENST00000395840 TMF1P82094 1093 aa11.79□□□□□ -0.52
RAE1-202ENST00000395840 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
RAE1-202ENST00000395840 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
RAE1-202ENST00000395840 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
RAE1-202ENST00000395840 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
RAE1-202ENST00000395840 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
RAE1-202ENST00000395840 AHDC1Q5TGY3 1603 aaPredicted RBP11.78□□□□□ -0.52
RAE1-202ENST00000395840 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
RAE1-202ENST00000395840 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
RAE1-202ENST00000395840 NUDT16Q96DE0 195 aaKnown RBP11.78□□□□□ -0.52
RAE1-202ENST00000395840 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
RAE1-202ENST00000395840 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
RAE1-202ENST00000395840 PHF8Q9UPP1 1060 aa11.77□□□□□ -0.52
RAE1-202ENST00000395840 PDE4CQ08493 712 aa11.77□□□□□ -0.53
RAE1-202ENST00000395840 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.53
RAE1-202ENST00000395840 MS4A1P11836 297 aa11.76□□□□□ -0.53
RAE1-202ENST00000395840 PSME1Q06323 249 aa11.76□□□□□ -0.53
RAE1-202ENST00000395840 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
RAE1-202ENST00000395840 TESK2Q96S53 571 aa11.76□□□□□ -0.53
RAE1-202ENST00000395840 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
RAE1-202ENST00000395840 ATP7BP35670 1465 aa11.76□□□□□ -0.53
RAE1-202ENST00000395840 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
RAE1-202ENST00000395840 PLEKHG3A1L390 1219 aa11.75□□□□□ -0.53
RAE1-202ENST00000395840 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
RAE1-202ENST00000395840 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
RAE1-202ENST00000395840 PHLPP1O60346 1717 aa11.74□□□□□ -0.53
RAE1-202ENST00000395840 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
RAE1-202ENST00000395840 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
RAE1-202ENST00000395840 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
RAE1-202ENST00000395840 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
RAE1-202ENST00000395840 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
RAE1-202ENST00000395840 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
RAE1-202ENST00000395840 NGDNQ8NEJ9 315 aaKnown RBP11.73□□□□□ -0.53
RAE1-202ENST00000395840 SOS2Q07890 1332 aaPredicted RBP11.73□□□□□ -0.53
RAE1-202ENST00000395840 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
RAE1-202ENST00000395840 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
RAE1-202ENST00000395840 ILDR1Q86SU0 546 aaPredicted RBP11.73□□□□□ -0.53
RAE1-202ENST00000395840 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
RAE1-202ENST00000395840 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
RAE1-202ENST00000395840 HSPA1LP34931 641 aa11.72□□□□□ -0.53
RAE1-202ENST00000395840 CLCN1P35523 988 aa11.72□□□□□ -0.53
RAE1-202ENST00000395840 SBNO1A3KN83 1393 aa11.71□□□□□ -0.53
RAE1-202ENST00000395840 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
RAE1-202ENST00000395840 FOXO3O43524 673 aa11.71□□□□□ -0.54
RAE1-202ENST00000395840 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.54
RAE1-202ENST00000395840 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.54
RAE1-202ENST00000395840 PRDM4Q9UKN5 801 aa11.71□□□□□ -0.54
RAE1-202ENST00000395840 JCADQ9P266 1359 aa11.71□□□□□ -0.54
RAE1-202ENST00000395840 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
RAE1-202ENST00000395840 HDGFL2Q7Z4V5 671 aaPredicted RBP11.7□□□□□ -0.54
RAE1-202ENST00000395840 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
RAE1-202ENST00000395840 PXDNQ92626 1479 aa11.69□□□□□ -0.54
RAE1-202ENST00000395840 PMFBP1Q8TBY8 1022 aa11.69□□□□□ -0.54
RAE1-202ENST00000395840 ACEP12821 1306 aa11.69□□□□□ -0.54
RAE1-202ENST00000395840 ARHGEF10O15013 1369 aa11.69□□□□□ -0.54
RAE1-202ENST00000395840 RGS3P49796 1198 aa11.69□□□□□ -0.54
RAE1-202ENST00000395840 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
RAE1-202ENST00000395840 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
RAE1-202ENST00000395840 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
RAE1-202ENST00000395840 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
RAE1-202ENST00000395840 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
RAE1-202ENST00000395840 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
RAE1-202ENST00000395840 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
RAE1-202ENST00000395840 TNS3Q68CZ2 1445 aa11.67□□□□□ -0.54
RAE1-202ENST00000395840 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
RAE1-202ENST00000395840 SPATA31A3Q5VYP0 1347 aa11.67□□□□□ -0.54
RAE1-202ENST00000395840 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
RAE1-202ENST00000395840 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
RAE1-202ENST00000395840 TTC21AQ8NDW8 1320 aa11.66□□□□□ -0.54
RAE1-202ENST00000395840 AKAP12Q02952 1782 aa11.65□□□□□ -0.54
RAE1-202ENST00000395840 ARXQ96QS3 562 aa11.65□□□□□ -0.54
RAE1-202ENST00000395840 KTN1Q86UP2 1357 aaKnown RBP11.65□□□□□ -0.54
RAE1-202ENST00000395840 USP6P35125 1406 aa11.65□□□□□ -0.54
RAE1-202ENST00000395840 ANKRD36BQ8N2N9 1353 aa11.65□□□□□ -0.54
RAE1-202ENST00000395840 COL22A1Q8NFW1 1626 aaPredicted RBP11.65□□□□□ -0.55
RAE1-202ENST00000395840 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
RAE1-202ENST00000395840 TRPM3Q9HCF6 1732 aaPredicted RBP11.64□□□□□ -0.55
RAE1-202ENST00000395840 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
RAE1-202ENST00000395840 PNPLA6Q8IY17 1366 aa11.64□□□□□ -0.55
RAE1-202ENST00000395840 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
RAE1-202ENST00000395840 DDX17Q92841 729 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms