RNA–Protein interactions for RNA: ENST00000395833.7

LMO2-202, Transcript of LIM domain only 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-202ENST00000395833 SENP3-EIF4A1A0A087X0R7 540 aa39.3■■■■□ 3.88
LMO2-202ENST00000395833 STRCQ7RTU9 1775 aa39.29■■■■□ 3.88
LMO2-202ENST00000395833 COG3Q96JB2 828 aa39.26■■■■□ 3.88
LMO2-202ENST00000395833 ZRANB1Q9UGI0 708 aa39.25■■■■□ 3.87
LMO2-202ENST00000395833 STRCP1A6NGW2 1772 aa39.24■■■■□ 3.87
LMO2-202ENST00000395833 GTF3C3Q9Y5Q9 886 aa39.22■■■■□ 3.87
LMO2-202ENST00000395833 SCAF1Q9H7N4 1312 aaKnown RBP39.22■■■■□ 3.87
LMO2-202ENST00000395833 SHPRHQ149N8 1683 aa39.21■■■■□ 3.87
LMO2-202ENST00000395833 SSH2Q76I76 1423 aa39.2■■■■□ 3.87
LMO2-202ENST00000395833 PHF8Q9UPP1 1060 aa39.19■■■■□ 3.86
LMO2-202ENST00000395833 TTC21AQ8NDW8 1320 aa39.19■■■■□ 3.86
LMO2-202ENST00000395833 TMEM94Q12767 1356 aa39.18■■■■□ 3.86
LMO2-202ENST00000395833 SALL2Q9Y467 1007 aaPredicted RBP39.16■■■■□ 3.86
LMO2-202ENST00000395833 C19orf44Q9H6X5 657 aa39.15■■■■□ 3.86
LMO2-202ENST00000395833 ESCO1Q5FWF5 840 aa39.14■■■■□ 3.86
LMO2-202ENST00000395833 OVOS2A0A0J9YW53 1432 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 OVOS2Q6IE36 1432 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 NCOA3Q9Y6Q9 1424 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 AATKQ6ZMQ8 1374 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 FBLN1P23142 703 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 CCDC146Q8IYE0 955 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 POLKQ9UBT6 870 aa39.11■■■■□ 3.85
LMO2-202ENST00000395833 COL3A1P02461 1466 aaPredicted RBP39.1■■■■□ 3.85
LMO2-202ENST00000395833 PPM1GO15355 546 aaPredicted RBP39.08■■■■□ 3.85
LMO2-202ENST00000395833 MAP2P11137 1827 aaKnown RBP39.08■■■■□ 3.85
LMO2-202ENST00000395833 NUDCQ9Y266 331 aa39.07■■■■□ 3.85
LMO2-202ENST00000395833 ATF3P18847 181 aa39.05■■■■□ 3.84
LMO2-202ENST00000395833 PNPLA6Q8IY17 1366 aa39.05■■■■□ 3.84
LMO2-202ENST00000395833 EMILIN1Q9Y6C2 1016 aa39.04■■■■□ 3.84
LMO2-202ENST00000395833 DCCP43146 1447 aa39.03■■■■□ 3.84
LMO2-202ENST00000395833 SMG6Q86US8 1419 aaKnown RBP39.03■■■■□ 3.84
LMO2-202ENST00000395833 ORAI2Q96SN7 254 aa39.03■■■■□ 3.84
LMO2-202ENST00000395833 PIK3C2AO00443 1686 aa39.02■■■■□ 3.84
LMO2-202ENST00000395833 DIAPH1O60610 1272 aaKnown RBP39.02■■■■□ 3.84
LMO2-202ENST00000395833 U2AF1L5P0DN76 240 aaPredicted RBP39.02■■■■□ 3.84
LMO2-202ENST00000395833 U2AF1Q01081 240 aaKnown RBP eCLIP39.02■■■■□ 3.84
LMO2-202ENST00000395833 C1orf167Q5SNV9 1468 aa39.01■■■■□ 3.84
LMO2-202ENST00000395833 USP31Q70CQ4 1352 aa39.01■■■■□ 3.84
LMO2-202ENST00000395833 PAK3O75914 559 aaPredicted RBP39.01■■■■□ 3.84
LMO2-202ENST00000395833 U2SURPO15042 1029 aaKnown RBP39■■■■□ 3.83
LMO2-202ENST00000395833 RRS1Q15050 365 aaKnown RBP39■■■■□ 3.83
LMO2-202ENST00000395833 ZNF335Q9H4Z2 1342 aaPredicted RBP39■■■■□ 3.83
LMO2-202ENST00000395833 PSME1Q06323 249 aa39■■■■□ 3.83
LMO2-202ENST00000395833 CDK12Q9NYV4 1490 aaPredicted RBP38.99■■■■□ 3.83
LMO2-202ENST00000395833 MSH6P52701 1360 aa38.98■■■■□ 3.83
LMO2-202ENST00000395833 APAF1O14727 1248 aa38.97■■■■□ 3.83
LMO2-202ENST00000395833 PDE3BQ13370 1112 aa38.97■■■■□ 3.83
LMO2-202ENST00000395833 NLRP6P59044 892 aa38.96■■■■□ 3.83
LMO2-202ENST00000395833 MST1RQ04912 1400 aa38.95■■■■□ 3.83
LMO2-202ENST00000395833 RUNDC1Q96C34 613 aa38.95■■■■□ 3.83
LMO2-202ENST00000395833 KIF1AQ12756 1690 aa38.95■■■■□ 3.83
LMO2-202ENST00000395833 DMRT2Q9Y5R5 561 aa38.94■■■■□ 3.82
LMO2-202ENST00000395833 SOX12O15370 315 aa38.94■■■■□ 3.82
LMO2-202ENST00000395833 CADPS2Q86UW7 1296 aa38.94■■■■□ 3.82
LMO2-202ENST00000395833 ABTB2Q8N961 1025 aa38.94■■■■□ 3.82
LMO2-202ENST00000395833 LRRC7Q96NW7 1537 aa38.93■■■■□ 3.82
LMO2-202ENST00000395833 NUTM2GQ5VZR2 741 aa38.92■■■■□ 3.82
LMO2-202ENST00000395833 XIRP1Q702N8 1843 aaKnown RBP38.91■■■■□ 3.82
LMO2-202ENST00000395833 FOXO3O43524 673 aa38.9■■■■□ 3.82
LMO2-202ENST00000395833 USP54Q70EL1 1684 aa38.88■■■■□ 3.82
LMO2-202ENST00000395833 NGEFQ8N5V2 710 aa38.86■■■■□ 3.81
LMO2-202ENST00000395833 XPCQ01831 940 aaPredicted RBP38.85■■■■□ 3.81
LMO2-202ENST00000395833 SUPT16HQ9Y5B9 1047 aaKnown RBP38.84■■■■□ 3.81
LMO2-202ENST00000395833 MARF1Q9Y4F3 1742 aaKnown RBP38.84■■■■□ 3.81
LMO2-202ENST00000395833 IQSEC2Q5JU85 1478 aa38.84■■■■□ 3.81
LMO2-202ENST00000395833 IL13P35225 146 aa38.82■■■■□ 3.81
LMO2-202ENST00000395833 TCP11L2Q8N4U5 519 aa38.82■■■■□ 3.81
LMO2-202ENST00000395833 CDCA7LQ96GN5 454 aa38.82■■■■□ 3.81
LMO2-202ENST00000395833 NEFLP07196 543 aa38.81■■■■□ 3.8
LMO2-202ENST00000395833 MAP3K19Q56UN5 1328 aa38.81■■■■□ 3.8
LMO2-202ENST00000395833 ZNF521Q96K83 1311 aa38.81■■■■□ 3.8
LMO2-202ENST00000395833 KRT28Q7Z3Y7 464 aa38.81■■■■□ 3.8
LMO2-202ENST00000395833 PEAK1Q9H792 1746 aa38.8■■■■□ 3.8
LMO2-202ENST00000395833 PNNQ9H307 717 aaKnown RBP38.8■■■■□ 3.8
LMO2-202ENST00000395833 MAPK8IP3Q9UPT6 1336 aa38.78■■■■□ 3.8
LMO2-202ENST00000395833 RRP7AQ9Y3A4 280 aaKnown RBP38.78■■■■□ 3.8
LMO2-202ENST00000395833 SBNO1A3KN83 1393 aa38.76■■■■□ 3.8
LMO2-202ENST00000395833 TRPM3Q9HCF6 1732 aaPredicted RBP38.76■■■■□ 3.8
LMO2-202ENST00000395833 GOLGA2Q08379 1002 aa38.75■■■■□ 3.79
LMO2-202ENST00000395833 NEUROD2Q15784 382 aa38.75■■■■□ 3.79
LMO2-202ENST00000395833 PLEKHF1Q96S99 279 aa38.75■■■■□ 3.79
LMO2-202ENST00000395833 FCHSD2O94868 740 aa38.74■■■■□ 3.79
LMO2-202ENST00000395833 AMPHP49418 695 aa38.74■■■■□ 3.79
LMO2-202ENST00000395833 FLT4P35916 1363 aa38.73■■■■□ 3.79
LMO2-202ENST00000395833 EIF4A2Q14240 407 aaKnown RBP38.72■■■■□ 3.79
LMO2-202ENST00000395833 LMOD2Q6P5Q4 547 aa38.72■■■■□ 3.79
LMO2-202ENST00000395833 HSP90AB2PQ58FF8 381 aa38.71■■■■□ 3.79
LMO2-202ENST00000395833 RSPH6AQ9H0K4 717 aa38.71■■■■□ 3.79
LMO2-202ENST00000395833 HMOX1P09601 288 aa38.7■■■■□ 3.79
LMO2-202ENST00000395833 NEFMP07197 916 aa38.68■■■■□ 3.78
LMO2-202ENST00000395833 PRKAR2BP31323 418 aa38.68■■■■□ 3.78
LMO2-202ENST00000395833 FKBP8Q14318 412 aa38.68■■■■□ 3.78
LMO2-202ENST00000395833 WWC1Q8IX03 1113 aa38.68■■■■□ 3.78
LMO2-202ENST00000395833 NPHP3Q7Z494 1330 aa38.68■■■■□ 3.78
LMO2-202ENST00000395833 DDX17Q92841 729 aaKnown RBP38.67■■■■□ 3.78
LMO2-202ENST00000395833 KCNH5Q8NCM2 988 aa38.66■■■■□ 3.78
LMO2-202ENST00000395833 KIF24Q5T7B8 1368 aa38.66■■■■□ 3.78
LMO2-202ENST00000395833 NCBP3Q53F19 620 aaKnown RBP38.65■■■■□ 3.78
LMO2-202ENST00000395833 CCDC27Q2M243 656 aa38.64■■■■□ 3.78
LMO2-202ENST00000395833 NFAT5O94916 1531 aa38.64■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms