RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
VAPB-202ENST00000395802 COG3Q96JB2 828 aa18.45■□□□□ 0.54
VAPB-202ENST00000395802 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
VAPB-202ENST00000395802 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
VAPB-202ENST00000395802 ORAI2Q96SN7 254 aa18.44■□□□□ 0.54
VAPB-202ENST00000395802 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
VAPB-202ENST00000395802 KIF20BQ96Q89 1820 aa18.44■□□□□ 0.54
VAPB-202ENST00000395802 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
VAPB-202ENST00000395802 SSH2Q76I76 1423 aa18.43■□□□□ 0.54
VAPB-202ENST00000395802 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
VAPB-202ENST00000395802 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
VAPB-202ENST00000395802 ANKRD26Q9UPS8 1709 aa18.42■□□□□ 0.54
VAPB-202ENST00000395802 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
VAPB-202ENST00000395802 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
VAPB-202ENST00000395802 FOXO3O43524 673 aa18.41■□□□□ 0.54
VAPB-202ENST00000395802 NME9Q86XW9 330 aa18.4■□□□□ 0.54
VAPB-202ENST00000395802 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.54
VAPB-202ENST00000395802 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
VAPB-202ENST00000395802 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
VAPB-202ENST00000395802 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
VAPB-202ENST00000395802 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
VAPB-202ENST00000395802 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
VAPB-202ENST00000395802 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
VAPB-202ENST00000395802 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
VAPB-202ENST00000395802 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
VAPB-202ENST00000395802 NLRP6P59044 892 aa18.35■□□□□ 0.53
VAPB-202ENST00000395802 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
VAPB-202ENST00000395802 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
VAPB-202ENST00000395802 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
VAPB-202ENST00000395802 TOM1O60784 492 aa18.33■□□□□ 0.53
VAPB-202ENST00000395802 MTHFSP49914 203 aa18.33■□□□□ 0.53
VAPB-202ENST00000395802 CCDC184Q52MB2 194 aa18.33■□□□□ 0.53
VAPB-202ENST00000395802 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.53
VAPB-202ENST00000395802 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.52
VAPB-202ENST00000395802 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
VAPB-202ENST00000395802 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
VAPB-202ENST00000395802 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.52
VAPB-202ENST00000395802 PIK3C2AO00443 1686 aa18.3■□□□□ 0.52
VAPB-202ENST00000395802 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
VAPB-202ENST00000395802 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
VAPB-202ENST00000395802 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
VAPB-202ENST00000395802 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
VAPB-202ENST00000395802 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
VAPB-202ENST00000395802 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
VAPB-202ENST00000395802 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
VAPB-202ENST00000395802 INSRP06213 1382 aa18.28■□□□□ 0.52
VAPB-202ENST00000395802 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
VAPB-202ENST00000395802 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
VAPB-202ENST00000395802 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.52
VAPB-202ENST00000395802 PXDNQ92626 1479 aa18.27■□□□□ 0.51
VAPB-202ENST00000395802 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.51
VAPB-202ENST00000395802 SMG6Q86US8 1419 aaKnown RBP18.27■□□□□ 0.51
VAPB-202ENST00000395802 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
VAPB-202ENST00000395802 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
VAPB-202ENST00000395802 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
VAPB-202ENST00000395802 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
VAPB-202ENST00000395802 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
VAPB-202ENST00000395802 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
VAPB-202ENST00000395802 DIAPH1O60610 1272 aaKnown RBP18.23■□□□□ 0.51
VAPB-202ENST00000395802 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
VAPB-202ENST00000395802 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
VAPB-202ENST00000395802 NHSL1Q5SYE7 1610 aa18.23■□□□□ 0.51
VAPB-202ENST00000395802 USP19O94966 1318 aa18.23■□□□□ 0.51
VAPB-202ENST00000395802 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
VAPB-202ENST00000395802 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
VAPB-202ENST00000395802 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
VAPB-202ENST00000395802 ROBO1Q9Y6N7 1651 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 SOX12O15370 315 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 GCP02774 474 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 AMPHP49418 695 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
VAPB-202ENST00000395802 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
VAPB-202ENST00000395802 FLT4P35916 1363 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 UBAP1LF5GYI3 381 aa18.21■□□□□ 0.51
VAPB-202ENST00000395802 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
VAPB-202ENST00000395802 SLIT3O75094 1523 aa18.2■□□□□ 0.5
VAPB-202ENST00000395802 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
VAPB-202ENST00000395802 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
VAPB-202ENST00000395802 FBLN1P23142 703 aa18.19■□□□□ 0.5
VAPB-202ENST00000395802 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
VAPB-202ENST00000395802 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
VAPB-202ENST00000395802 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
VAPB-202ENST00000395802 COL3A1P02461 1466 aaPredicted RBP18.17■□□□□ 0.5
VAPB-202ENST00000395802 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
VAPB-202ENST00000395802 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
VAPB-202ENST00000395802 MED1Q15648 1581 aaPredicted RBP18.16■□□□□ 0.5
VAPB-202ENST00000395802 NFAT5O94916 1531 aa18.16■□□□□ 0.5
VAPB-202ENST00000395802 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
VAPB-202ENST00000395802 PIP4K2BP78356 416 aa18.16■□□□□ 0.5
VAPB-202ENST00000395802 BLMP54132 1417 aaPredicted RBP18.15■□□□□ 0.5
VAPB-202ENST00000395802 NEFMP07197 916 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 HOXC9P31274 260 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 IL13P35225 146 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.5
VAPB-202ENST00000395802 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 NGEFQ8N5V2 710 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 IP6K1Q92551 441 aa18.14■□□□□ 0.5
VAPB-202ENST00000395802 SHPRHQ149N8 1683 aa18.13■□□□□ 0.49
VAPB-202ENST00000395802 HSP90AB2PQ58FF8 381 aa18.13■□□□□ 0.49
VAPB-202ENST00000395802 FCHSD2O94868 740 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms