RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
SREBF1-204ENST00000395756 CCDC61Q9Y6R9 512 aa23.19■■□□□ 1.3
SREBF1-204ENST00000395756 RIPK4P57078 832 aa23.18■■□□□ 1.3
SREBF1-204ENST00000395756 NGEFQ8N5V2 710 aa23.18■■□□□ 1.3
SREBF1-204ENST00000395756 PPIP5K1Q6PFW1 1433 aa23.18■■□□□ 1.3
SREBF1-204ENST00000395756 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
SREBF1-204ENST00000395756 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
SREBF1-204ENST00000395756 EID1Q9Y6B2 187 aa23.17■■□□□ 1.3
SREBF1-204ENST00000395756 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
SREBF1-204ENST00000395756 ROBO2Q9HCK4 1378 aa23.15■■□□□ 1.3
SREBF1-204ENST00000395756 RGS3P49796 1198 aa23.15■■□□□ 1.3
SREBF1-204ENST00000395756 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
SREBF1-204ENST00000395756 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
SREBF1-204ENST00000395756 PRKAR2BP31323 418 aa23.14■■□□□ 1.3
SREBF1-204ENST00000395756 DEKP35659 375 aaKnown RBP23.14■■□□□ 1.3
SREBF1-204ENST00000395756 PRR36Q9H6K5 1346 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
SREBF1-204ENST00000395756 PDE4AP27815 886 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 COG3Q96JB2 828 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 MYH16Q9H6N6 1097 aa23.13■■□□□ 1.29
SREBF1-204ENST00000395756 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-204ENST00000395756 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
SREBF1-204ENST00000395756 EXOSC9Q06265 439 aaKnown RBP23.11■■□□□ 1.29
SREBF1-204ENST00000395756 AMOTL2Q9Y2J4 779 aa23.11■■□□□ 1.29
SREBF1-204ENST00000395756 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
SREBF1-204ENST00000395756 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
SREBF1-204ENST00000395756 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
SREBF1-204ENST00000395756 RBM33Q96EV2 1170 aaKnown RBP23.09■■□□□ 1.29
SREBF1-204ENST00000395756 NEFMP07197 916 aa23.09■■□□□ 1.29
SREBF1-204ENST00000395756 RLBP1P12271 317 aa23.09■■□□□ 1.29
SREBF1-204ENST00000395756 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
SREBF1-204ENST00000395756 ANP32AP39687 249 aaKnown RBP23.08■■□□□ 1.29
SREBF1-204ENST00000395756 USP32Q8NFA0 1604 aa23.07■■□□□ 1.28
SREBF1-204ENST00000395756 IGHDP01880 384 aa23.07■■□□□ 1.28
SREBF1-204ENST00000395756 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-204ENST00000395756 IQSEC2Q5JU85 1478 aa23.06■■□□□ 1.28
SREBF1-204ENST00000395756 ACEP12821 1306 aa23.06■■□□□ 1.28
SREBF1-204ENST00000395756 KDM2BQ8NHM5 1336 aa23.05■■□□□ 1.28
SREBF1-204ENST00000395756 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.05■■□□□ 1.28
SREBF1-204ENST00000395756 UBE2Q2Q8WVN8 375 aa23.05■■□□□ 1.28
SREBF1-204ENST00000395756 SMC4Q9NTJ3 1288 aa23.05■■□□□ 1.28
SREBF1-204ENST00000395756 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
SREBF1-204ENST00000395756 ELL2O00472 640 aaPredicted RBP23.04■■□□□ 1.28
SREBF1-204ENST00000395756 ADAMTS13Q76LX8 1427 aa23.04■■□□□ 1.28
SREBF1-204ENST00000395756 FCHSD2O94868 740 aa23.03■■□□□ 1.28
SREBF1-204ENST00000395756 PDE3AQ14432 1141 aa23.03■■□□□ 1.28
SREBF1-204ENST00000395756 PAK3O75914 559 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-204ENST00000395756 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
SREBF1-204ENST00000395756 DLC1Q96QB1 1528 aa23.03■■□□□ 1.28
SREBF1-204ENST00000395756 BACH2Q9BYV9 841 aa23.02■■□□□ 1.28
SREBF1-204ENST00000395756 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-204ENST00000395756 FTSJ3Q8IY81 847 aaKnown RBP23.01■■□□□ 1.27
SREBF1-204ENST00000395756 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
SREBF1-204ENST00000395756 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 PNNQ9H307 717 aaKnown RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 ATP7BP35670 1465 aa23■■□□□ 1.27
SREBF1-204ENST00000395756 EDC4Q6P2E9 1401 aaKnown RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 PNPLA6Q8IY17 1366 aa23■■□□□ 1.27
SREBF1-204ENST00000395756 PLEKHG5O94827 1062 aa23■■□□□ 1.27
SREBF1-204ENST00000395756 NGDNQ8NEJ9 315 aaKnown RBP23■■□□□ 1.27
SREBF1-204ENST00000395756 SSH1Q8WYL5 1049 aa23■■□□□ 1.27
SREBF1-204ENST00000395756 IL13P35225 146 aa22.99■■□□□ 1.27
SREBF1-204ENST00000395756 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
SREBF1-204ENST00000395756 SIRT1Q96EB6 747 aa22.99■■□□□ 1.27
SREBF1-204ENST00000395756 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
SREBF1-204ENST00000395756 CPS1P31327 1500 aa22.98■■□□□ 1.27
SREBF1-204ENST00000395756 FAM135BQ49AJ0 1406 aa22.98■■□□□ 1.27
SREBF1-204ENST00000395756 PLEKHG1Q9ULL1 1385 aa22.98■■□□□ 1.27
SREBF1-204ENST00000395756 TTC21BQ7Z4L5 1316 aa22.98■■□□□ 1.27
SREBF1-204ENST00000395756 PTPRUQ92729 1446 aa22.97■■□□□ 1.27
SREBF1-204ENST00000395756 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
SREBF1-204ENST00000395756 SETD1AO15047 1707 aaKnown RBP22.97■■□□□ 1.27
SREBF1-204ENST00000395756 MS4A1P11836 297 aa22.96■■□□□ 1.27
SREBF1-204ENST00000395756 MED14O60244 1454 aa22.96■■□□□ 1.27
SREBF1-204ENST00000395756 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
SREBF1-204ENST00000395756 KCNA6P17658 529 aa22.95■■□□□ 1.27
SREBF1-204ENST00000395756 HSP90AB2PQ58FF8 381 aa22.95■■□□□ 1.27
SREBF1-204ENST00000395756 ZKSCAN2Q63HK3 967 aa22.95■■□□□ 1.26
SREBF1-204ENST00000395756 NOB1Q9ULX3 412 aaKnown RBP22.95■■□□□ 1.26
SREBF1-204ENST00000395756 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
SREBF1-204ENST00000395756 IPO9Q96P70 1041 aaKnown RBP22.95■■□□□ 1.26
SREBF1-204ENST00000395756 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
SREBF1-204ENST00000395756 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
SREBF1-204ENST00000395756 UBR1Q8IWV7 1749 aa22.94■■□□□ 1.26
SREBF1-204ENST00000395756 ZBTB47Q9UFB7 747 aaPredicted RBP22.93■■□□□ 1.26
SREBF1-204ENST00000395756 NFE2L2Q16236 605 aa22.93■■□□□ 1.26
SREBF1-204ENST00000395756 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
SREBF1-204ENST00000395756 DZIP1LQ8IYY4 767 aaKnown RBP22.93■■□□□ 1.26
SREBF1-204ENST00000395756 RTN4Q9NQC3 1192 aaKnown RBP22.92■■□□□ 1.26
SREBF1-204ENST00000395756 TECPR2O15040 1411 aa22.92■■□□□ 1.26
SREBF1-204ENST00000395756 TBX22Q9Y458 520 aa22.92■■□□□ 1.26
SREBF1-204ENST00000395756 TRIM27P14373 513 aa22.91■■□□□ 1.26
SREBF1-204ENST00000395756 EIF4A2Q14240 407 aaKnown RBP22.9■■□□□ 1.26
SREBF1-204ENST00000395756 TSPYL6Q8N831 410 aa22.9■■□□□ 1.26
SREBF1-204ENST00000395756 NBR1Q14596 966 aa22.9■■□□□ 1.26
SREBF1-204ENST00000395756 PLEKHG3A1L390 1219 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms