RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.28■□□□□ 0.84
SREBF1-203ENST00000395751 LRSAM1Q6UWE0 723 aa20.28■□□□□ 0.84
SREBF1-203ENST00000395751 GPATCH11Q8N954 259 aa20.27■□□□□ 0.84
SREBF1-203ENST00000395751 NOB1Q9ULX3 412 aaKnown RBP20.27■□□□□ 0.84
SREBF1-203ENST00000395751 POLR3GO15318 223 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-203ENST00000395751 OLFM4Q6UX06 510 aa20.27■□□□□ 0.84
SREBF1-203ENST00000395751 FEZ1Q99689 392 aa20.27■□□□□ 0.84
SREBF1-203ENST00000395751 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.83
SREBF1-203ENST00000395751 GIMAP7Q8NHV1 300 aa20.27■□□□□ 0.83
SREBF1-203ENST00000395751 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
SREBF1-203ENST00000395751 GTF2A1P52655 376 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-203ENST00000395751 PAXBP1Q9Y5B6 917 aa20.26■□□□□ 0.83
SREBF1-203ENST00000395751 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
SREBF1-203ENST00000395751 IGSF3O75054 1194 aa20.25■□□□□ 0.83
SREBF1-203ENST00000395751 PSMA5P28066 241 aa20.24■□□□□ 0.83
SREBF1-203ENST00000395751 C1orf115Q9H7X2 142 aa20.24■□□□□ 0.83
SREBF1-203ENST00000395751 CPLX1O14810 134 aa20.24■□□□□ 0.83
SREBF1-203ENST00000395751 NOL7Q9UMY1 257 aaKnown RBP20.24■□□□□ 0.83
SREBF1-203ENST00000395751 RBM25P49756 843 aaKnown RBP20.24■□□□□ 0.83
SREBF1-203ENST00000395751 IGHDP01880 384 aa20.23■□□□□ 0.83
SREBF1-203ENST00000395751 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
SREBF1-203ENST00000395751 CCDC102AQ96A19 550 aa20.23■□□□□ 0.83
SREBF1-203ENST00000395751 IFIT2P09913 472 aaKnown RBP20.22■□□□□ 0.83
SREBF1-203ENST00000395751 MTHFSP49914 203 aa20.22■□□□□ 0.83
SREBF1-203ENST00000395751 CAGE1Q8TC20 777 aa20.22■□□□□ 0.83
SREBF1-203ENST00000395751 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
SREBF1-203ENST00000395751 TXLNBQ8N3L3 684 aa20.21■□□□□ 0.83
SREBF1-203ENST00000395751 OGFRQ9NZT2 677 aa20.21■□□□□ 0.83
SREBF1-203ENST00000395751 FAM177A1Q8N128 213 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-203ENST00000395751 NEMFO60524 1076 aa20.21■□□□□ 0.83
SREBF1-203ENST00000395751 FAM107BQ9H098 131 aa20.21■□□□□ 0.83
SREBF1-203ENST00000395751 CEP57L1Q8IYX8 460 aa20.2■□□□□ 0.82
SREBF1-203ENST00000395751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.823e-17■■■■■ 32.6
SREBF1-203ENST00000395751 TSR2Q969E8 191 aaKnown RBP20.2■□□□□ 0.82
SREBF1-203ENST00000395751 TRIM29Q14134 588 aa20.2■□□□□ 0.82
SREBF1-203ENST00000395751 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
SREBF1-203ENST00000395751 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
SREBF1-203ENST00000395751 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
SREBF1-203ENST00000395751 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
SREBF1-203ENST00000395751 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
SREBF1-203ENST00000395751 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
SREBF1-203ENST00000395751 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
SREBF1-203ENST00000395751 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
SREBF1-203ENST00000395751 CTR9Q6PD62 1173 aa20.19■□□□□ 0.82
SREBF1-203ENST00000395751 SERPINC1P01008 464 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 LARP1BQ659C4 914 aaKnown RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 PCMTD1Q96MG8 357 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 GBP3Q9H0R5 595 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 IPO4Q8TEX9 1081 aaKnown RBP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 SNX21Q969T3 373 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
SREBF1-203ENST00000395751 MAP3K1Q13233 1512 aa20.18■□□□□ 0.82
SREBF1-203ENST00000395751 PRIM1P49642 420 aaKnown RBP20.17■□□□□ 0.82
SREBF1-203ENST00000395751 SFPQP23246 707 aaKnown RBP eCLIP20.17■□□□□ 0.82
SREBF1-203ENST00000395751 FOSBP53539 338 aa20.17■□□□□ 0.82
SREBF1-203ENST00000395751 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
SREBF1-203ENST00000395751 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
SREBF1-203ENST00000395751 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
SREBF1-203ENST00000395751 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
SREBF1-203ENST00000395751 RAB3GAP1Q15042 981 aa20.16■□□□□ 0.82
SREBF1-203ENST00000395751 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-203ENST00000395751 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
SREBF1-203ENST00000395751 IGF1RP08069 1367 aa20.16■□□□□ 0.82
SREBF1-203ENST00000395751 URI1O94763 535 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-203ENST00000395751 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-203ENST00000395751 SMARCE1Q969G3 411 aa20.15■□□□□ 0.82
SREBF1-203ENST00000395751 TTC12Q9H892 705 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-203ENST00000395751 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
SREBF1-203ENST00000395751 CEP135Q66GS9 1140 aa20.15■□□□□ 0.82
SREBF1-203ENST00000395751 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
SREBF1-203ENST00000395751 UPF3BQ9BZI7 483 aaKnown RBP20.15■□□□□ 0.82
SREBF1-203ENST00000395751 CBFA2T2O43439 604 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 LMAN1P49257 510 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 BMP2KLQ5H9B9 411 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 CEP89Q96ST8 783 aa20.14■□□□□ 0.81
SREBF1-203ENST00000395751 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-203ENST00000395751 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
SREBF1-203ENST00000395751 VGLL3A8MV65 326 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 CEBPZQ03701 1054 aaKnown RBP20.13■□□□□ 0.81
SREBF1-203ENST00000395751 MYRIPQ8NFW9 859 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 GABPB1Q06547 395 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-203ENST00000395751 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 TMEM57Q8N5G2 664 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 CENPHQ9H3R5 247 aa20.13■□□□□ 0.81
SREBF1-203ENST00000395751 ZSCAN31Q96LW9 406 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-203ENST00000395751 TRMT1Q9NXH9 659 aaKnown RBP20.12■□□□□ 0.81
SREBF1-203ENST00000395751 SHTN1A0MZ66 631 aa20.12■□□□□ 0.81
SREBF1-203ENST00000395751 CAMK4Q16566 473 aa20.12■□□□□ 0.81
SREBF1-203ENST00000395751 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
SREBF1-203ENST00000395751 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
SREBF1-203ENST00000395751 GNAI3P08754 354 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms