RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SF3B2Q13435 895 aaKnown RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 SF3A1Q15459 793 aaKnown RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 RNF217Q8TC41 542 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 ANP32BQ92688 251 aaKnown RBP5.39□□□□□ -1.55
HERC4-204ENST00000395198 BCL2L13Q9BXK5 485 aa5.39□□□□□ -1.55
HERC4-204ENST00000395198 MAP2K1Q02750 393 aaPredicted RBP5.38□□□□□ -1.55
HERC4-204ENST00000395198 BIRC2Q13490 618 aa5.38□□□□□ -1.55
HERC4-204ENST00000395198 CHST12Q9NRB3 414 aa5.38□□□□□ -1.55
HERC4-204ENST00000395198 MAP9Q49MG5 647 aa5.38□□□□□ -1.55
HERC4-204ENST00000395198 FMNL3Q8IVF7 1028 aa5.38□□□□□ -1.55
HERC4-204ENST00000395198 DHX38Q92620 1227 aaKnown RBP5.38□□□□□ -1.55
HERC4-204ENST00000395198 HMGB1P1B2RPK0 211 aaPredicted RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 MSH5O43196 834 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 NAT1P18440 290 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 HSP90AA2PQ14568 343 aaPredicted RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 LONRF1Q17RB8 773 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 DUSP27Q5VZP5 1158 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 NT5DC4Q86YG4 428 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 RSPH1Q8WYR4 309 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 DDX27Q96GQ7 796 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 DIS3Q9Y2L1 958 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 CENPJQ9HC77 1338 aaPredicted RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 RASSF7Q02833 373 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 HNRNPUL2Q1KMD3 747 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 JAZF1Q86VZ6 243 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 TTC39BQ5VTQ0 682 aaPredicted RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 NGDNQ8NEJ9 315 aaKnown RBP5.37□□□□□ -1.55
HERC4-204ENST00000395198 PBXIP1Q96AQ6 731 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 SEZ6LQ9BYH1 1024 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 STK25O00506 426 aa5.37□□□□□ -1.55
HERC4-204ENST00000395198 POU5F1Q01860 360 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 BMS1Q14692 1282 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 C9orf131Q5VYM1 1079 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 FBXO31Q5XUX0 539 aaPredicted RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 RAVER1Q8IY67 606 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 SYNPO2Q9UMS6 1093 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 GNEQ9Y223 722 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 TERF1P54274 439 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 HSP90AB2PQ58FF8 381 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 PAGR1Q9BTK6 254 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 IPO8O15397 1037 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 RFX1P22670 979 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 CFAP70Q5T0N1 1121 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 TTC30AQ86WT1 665 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 SKAP1Q86WV1 359 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 GLMNQ92990 594 aa5.36□□□□□ -1.55
HERC4-204ENST00000395198 RSPH9Q9H1X1 276 aaPredicted RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 DMGDHQ9UI17 866 aaKnown RBP5.36□□□□□ -1.55
HERC4-204ENST00000395198 EP400NLQ6ZTU2 488 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 PCGF5Q86SE9 256 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 ARPC5LQ9BPX5 153 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 ZKSCAN8Q15776 578 aaPredicted RBP5.35□□□□□ -1.55
HERC4-204ENST00000395198 GPIHBP1Q8IV16 184 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 EPAS1Q99814 870 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 MLLT3P42568 568 aaPredicted RBP5.35□□□□□ -1.55
HERC4-204ENST00000395198 KANK3Q6NY19 840 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 OXER1Q8TDS5 423 aa5.35□□□□□ -1.55
HERC4-204ENST00000395198 FGAP02671 866 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 NAT2P11245 290 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 ADAMTS19Q8TE59 1207 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 BSDC1Q9NW68 430 aaPredicted RBP5.34□□□□□ -1.55
HERC4-204ENST00000395198 SFMBT1Q9UHJ3 866 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 GPR37O15354 613 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 SPC25Q9HBM1 224 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 RAI14Q9P0K7 980 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 SCINQ9Y6U3 715 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 SMAPO00193 183 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 RAD51AP2Q09MP3 1159 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 PIK3R5Q8WYR1 880 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 MYCBPQ99417 103 aaPredicted RBP5.34□□□□□ -1.55
HERC4-204ENST00000395198 SMC3Q9UQE7 1217 aa5.34□□□□□ -1.55
HERC4-204ENST00000395198 ATG7O95352 703 aa5.34□□□□□ -1.56
HERC4-204ENST00000395198 LDLRAD1Q5T700 205 aa5.34□□□□□ -1.56
HERC4-204ENST00000395198 SNRNP27Q8WVK2 155 aaKnown RBP5.34□□□□□ -1.56
HERC4-204ENST00000395198 CEP63Q96MT8 703 aa5.34□□□□□ -1.56
HERC4-204ENST00000395198 PCDH12Q9NPG4 1184 aa5.34□□□□□ -1.56
HERC4-204ENST00000395198 COL4A3BPQ9Y5P4 624 aa5.34□□□□□ -1.56
HERC4-204ENST00000395198 XPCQ01831 940 aaPredicted RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 DHX8Q14562 1220 aaKnown RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 ZRSR2Q15696 482 aaKnown RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 SNRKQ9NRH2 765 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 TTF2Q9UNY4 1162 aaKnown RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 SLC45A1Q9Y2W3 748 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 C11orf95C9JLR9 678 aaPredicted RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 LDHCP07864 332 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 VDRP11473 427 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 VAMP1P23763 118 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 SIM2Q14190 667 aaPredicted RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 EFCAB2Q5VUJ9 269 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 LMNB1P20700 586 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 PHLDB3Q6NSJ2 640 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 VRTNQ9H8Y1 702 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 IQSEC3Q9UPP2 1182 aaPredicted RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 THRAP3Q9Y2W1 955 aaKnown RBP5.33□□□□□ -1.56
HERC4-204ENST00000395198 SYNRGQ9UMZ2 1314 aa5.33□□□□□ -1.56
HERC4-204ENST00000395198 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms