RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 GRXCR2A6NFK2 248 aa16.13■□□□□ 0.17
RTN1-203ENST00000395090 EVI5O60447 810 aa16.13■□□□□ 0.17
RTN1-203ENST00000395090 GPIHBP1Q8IV16 184 aa16.12■□□□□ 0.17
RTN1-203ENST00000395090 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
RTN1-203ENST00000395090 PTGER2P43116 358 aa16.11■□□□□ 0.17
RTN1-203ENST00000395090 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
RTN1-203ENST00000395090 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
RTN1-203ENST00000395090 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
RTN1-203ENST00000395090 MYOM2P54296 1465 aa16.09■□□□□ 0.17
RTN1-203ENST00000395090 TMEM131LA2VDJ0 1609 aa16.09■□□□□ 0.17
RTN1-203ENST00000395090 TNRQ92752 1358 aa16.09■□□□□ 0.17
RTN1-203ENST00000395090 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
RTN1-203ENST00000395090 ZMYND10O75800 440 aa16.08■□□□□ 0.17
RTN1-203ENST00000395090 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.17
RTN1-203ENST00000395090 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
RTN1-203ENST00000395090 NRXN1Q9ULB1 1477 aa16.07■□□□□ 0.16
RTN1-203ENST00000395090 DDX12PQ92771 950 aa16.07■□□□□ 0.16
RTN1-203ENST00000395090 GPRASP1Q5JY77 1395 aa16.06■□□□□ 0.16
RTN1-203ENST00000395090 ZFYVE9O95405 1425 aa16.06■□□□□ 0.16
RTN1-203ENST00000395090 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
RTN1-203ENST00000395090 C3P01024 1663 aa16.06■□□□□ 0.16
RTN1-203ENST00000395090 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
RTN1-203ENST00000395090 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
RTN1-203ENST00000395090 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
RTN1-203ENST00000395090 SCUBE2Q9NQ36 999 aa16.05■□□□□ 0.16
RTN1-203ENST00000395090 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
RTN1-203ENST00000395090 MADDQ8WXG6 1647 aa16.04■□□□□ 0.16
RTN1-203ENST00000395090 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
RTN1-203ENST00000395090 HSPA5P11021 654 aaKnown RBP16.04■□□□□ 0.16
RTN1-203ENST00000395090 MAMSTRQ6ZN01 415 aa16.04■□□□□ 0.16
RTN1-203ENST00000395090 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
RTN1-203ENST00000395090 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 OSBPP22059 807 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 PCDHGA4Q9Y5G9 962 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 PPLO60437 1756 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
RTN1-203ENST00000395090 NEXMIFQ5QGS0 1516 aa16.03■□□□□ 0.16
RTN1-203ENST00000395090 SLAIN1Q8ND83 568 aa16.02■□□□□ 0.16
RTN1-203ENST00000395090 BARGINQ6ZT62 677 aa16.01■□□□□ 0.15
RTN1-203ENST00000395090 SLC24A3Q9HC58 644 aa16.01■□□□□ 0.15
RTN1-203ENST00000395090 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
RTN1-203ENST00000395090 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
RTN1-203ENST00000395090 C14orf93Q9H972 538 aaKnown RBP16.01■□□□□ 0.15
RTN1-203ENST00000395090 USP47Q96K76 1375 aa16■□□□□ 0.15
RTN1-203ENST00000395090 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
RTN1-203ENST00000395090 KIAA1210Q9ULL0 1709 aa15.99■□□□□ 0.15
RTN1-203ENST00000395090 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
RTN1-203ENST00000395090 MYO5BQ9ULV0 1848 aa15.99■□□□□ 0.15
RTN1-203ENST00000395090 LAMC1P11047 1609 aa15.99■□□□□ 0.15
RTN1-203ENST00000395090 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
RTN1-203ENST00000395090 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
RTN1-203ENST00000395090 HDGFP51858 240 aaKnown RBP15.97■□□□□ 0.15
RTN1-203ENST00000395090 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
RTN1-203ENST00000395090 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.97■□□□□ 0.15
RTN1-203ENST00000395090 RIMS2Q9UQ26 1411 aa15.96■□□□□ 0.15
RTN1-203ENST00000395090 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.14
RTN1-203ENST00000395090 NUTM2DQ5VT03 806 aaPredicted RBP15.95■□□□□ 0.14
RTN1-203ENST00000395090 UBR1Q8IWV7 1749 aa15.95■□□□□ 0.14
RTN1-203ENST00000395090 PTPRMP28827 1452 aa15.94■□□□□ 0.14
RTN1-203ENST00000395090 ST20-MTHFSA0A0A6YYL1 179 aa15.94■□□□□ 0.14
RTN1-203ENST00000395090 GPR37O15354 613 aa15.94■□□□□ 0.14
RTN1-203ENST00000395090 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
RTN1-203ENST00000395090 SETD1BQ9UPS6 1966 aaKnown RBP15.94■□□□□ 0.14
RTN1-203ENST00000395090 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
RTN1-203ENST00000395090 HOXB3P14651 431 aaPredicted RBP15.93■□□□□ 0.14
RTN1-203ENST00000395090 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
RTN1-203ENST00000395090 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
RTN1-203ENST00000395090 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
RTN1-203ENST00000395090 RIMBP2O15034 1052 aa15.91■□□□□ 0.14
RTN1-203ENST00000395090 PHF14O94880 888 aa15.91■□□□□ 0.14
RTN1-203ENST00000395090 SCAF11Q99590 1463 aaKnown RBP15.91■□□□□ 0.14
RTN1-203ENST00000395090 ADGRB1O14514 1584 aa15.9■□□□□ 0.14
RTN1-203ENST00000395090 ARHGAP23Q9P227 1491 aa15.9■□□□□ 0.14
RTN1-203ENST00000395090 EPAS1Q99814 870 aa15.9■□□□□ 0.14
RTN1-203ENST00000395090 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
RTN1-203ENST00000395090 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
RTN1-203ENST00000395090 MYO3AQ8NEV4 1616 aa15.9■□□□□ 0.14
RTN1-203ENST00000395090 SLIT1O75093 1534 aa15.89■□□□□ 0.14
RTN1-203ENST00000395090 LTKP29376 864 aa15.89■□□□□ 0.13
RTN1-203ENST00000395090 TESK2Q96S53 571 aa15.89■□□□□ 0.13
RTN1-203ENST00000395090 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
RTN1-203ENST00000395090 WASHC2AQ641Q2 1341 aa15.89■□□□□ 0.13
RTN1-203ENST00000395090 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
RTN1-203ENST00000395090 IQGAP1P46940 1657 aa15.87■□□□□ 0.13
RTN1-203ENST00000395090 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
RTN1-203ENST00000395090 CEP170BQ9Y4F5 1589 aaPredicted RBP15.87■□□□□ 0.13
RTN1-203ENST00000395090 FCHSD2O94868 740 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 AK7Q96M32 723 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 PCDHGA10Q9Y5H3 936 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
RTN1-203ENST00000395090 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
RTN1-203ENST00000395090 ARSIQ5FYB1 569 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 ZNF710Q8N1W2 664 aa15.86■□□□□ 0.13
RTN1-203ENST00000395090 EIF3AQ14152 1382 aaKnown RBP15.85■□□□□ 0.13
RTN1-203ENST00000395090 KIF7Q2M1P5 1343 aa15.85■□□□□ 0.13
RTN1-203ENST00000395090 PLEKHG1Q9ULL1 1385 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms