RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 FYB1O15117 783 aa16.78■□□□□ 0.28
SSH2-203ENST00000394848 TOM1O60784 492 aa16.77■□□□□ 0.28
SSH2-203ENST00000394848 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.28
SSH2-203ENST00000394848 ORAI2Q96SN7 254 aa16.77■□□□□ 0.28
SSH2-203ENST00000394848 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.28
SSH2-203ENST00000394848 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
SSH2-203ENST00000394848 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
SSH2-203ENST00000394848 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
SSH2-203ENST00000394848 MTHFSP49914 203 aa16.75■□□□□ 0.27
SSH2-203ENST00000394848 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
SSH2-203ENST00000394848 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
SSH2-203ENST00000394848 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
SSH2-203ENST00000394848 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
SSH2-203ENST00000394848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSH2-203ENST00000394848 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
SSH2-203ENST00000394848 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
SSH2-203ENST00000394848 NEFLP07196 543 aa16.73■□□□□ 0.27
SSH2-203ENST00000394848 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
SSH2-203ENST00000394848 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
SSH2-203ENST00000394848 ACEP12821 1306 aa16.73■□□□□ 0.27
SSH2-203ENST00000394848 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
SSH2-203ENST00000394848 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
SSH2-203ENST00000394848 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
SSH2-203ENST00000394848 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
SSH2-203ENST00000394848 FKBP8Q14318 412 aa16.71■□□□□ 0.27
SSH2-203ENST00000394848 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
SSH2-203ENST00000394848 FOXO3O43524 673 aa16.7■□□□□ 0.26
SSH2-203ENST00000394848 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
SSH2-203ENST00000394848 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
SSH2-203ENST00000394848 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
SSH2-203ENST00000394848 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
SSH2-203ENST00000394848 PSME1Q06323 249 aa16.67■□□□□ 0.26
SSH2-203ENST00000394848 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
SSH2-203ENST00000394848 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
SSH2-203ENST00000394848 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
SSH2-203ENST00000394848 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
SSH2-203ENST00000394848 NME9Q86XW9 330 aa16.66■□□□□ 0.26
SSH2-203ENST00000394848 USP6P35125 1406 aa16.65■□□□□ 0.26
SSH2-203ENST00000394848 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
SSH2-203ENST00000394848 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
SSH2-203ENST00000394848 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
SSH2-203ENST00000394848 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
SSH2-203ENST00000394848 APAF1O14727 1248 aa16.64■□□□□ 0.25
SSH2-203ENST00000394848 COG3Q96JB2 828 aa16.63■□□□□ 0.25
SSH2-203ENST00000394848 ROBO1Q9Y6N7 1651 aa16.63■□□□□ 0.25
SSH2-203ENST00000394848 XPCQ01831 940 aaPredicted RBP16.62■□□□□ 0.25
SSH2-203ENST00000394848 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
SSH2-203ENST00000394848 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
SSH2-203ENST00000394848 TTC21BQ7Z4L5 1316 aa16.62■□□□□ 0.25
SSH2-203ENST00000394848 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
SSH2-203ENST00000394848 PXDNQ92626 1479 aa16.61■□□□□ 0.25
SSH2-203ENST00000394848 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
SSH2-203ENST00000394848 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSH2-203ENST00000394848 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
SSH2-203ENST00000394848 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
SSH2-203ENST00000394848 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
SSH2-203ENST00000394848 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
SSH2-203ENST00000394848 FBLN1P23142 703 aa16.6■□□□□ 0.25
SSH2-203ENST00000394848 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
SSH2-203ENST00000394848 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
SSH2-203ENST00000394848 ZNF521Q96K83 1311 aa16.59■□□□□ 0.25
SSH2-203ENST00000394848 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
SSH2-203ENST00000394848 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SSH2-203ENST00000394848 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
SSH2-203ENST00000394848 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
SSH2-203ENST00000394848 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
SSH2-203ENST00000394848 MON2Q7Z3U7 1717 aa16.58■□□□□ 0.24
SSH2-203ENST00000394848 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
SSH2-203ENST00000394848 IRX6P78412 446 aaPredicted RBP16.58■□□□□ 0.24
SSH2-203ENST00000394848 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
SSH2-203ENST00000394848 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
SSH2-203ENST00000394848 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
SSH2-203ENST00000394848 SPATA31A3Q5VYP0 1347 aa16.58■□□□□ 0.24
SSH2-203ENST00000394848 AATKQ6ZMQ8 1374 aa16.57■□□□□ 0.24
SSH2-203ENST00000394848 LRRC59Q96AG4 307 aaKnown RBP16.56■□□□□ 0.24
SSH2-203ENST00000394848 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
SSH2-203ENST00000394848 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
SSH2-203ENST00000394848 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
SSH2-203ENST00000394848 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
SSH2-203ENST00000394848 EMILIN1Q9Y6C2 1016 aa16.55■□□□□ 0.24
SSH2-203ENST00000394848 TNS3Q68CZ2 1445 aa16.55■□□□□ 0.24
SSH2-203ENST00000394848 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
SSH2-203ENST00000394848 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
SSH2-203ENST00000394848 RCAN3Q9UKA8 241 aa16.54■□□□□ 0.24
SSH2-203ENST00000394848 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
SSH2-203ENST00000394848 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
SSH2-203ENST00000394848 TRPM3Q9HCF6 1732 aaPredicted RBP16.54■□□□□ 0.24
SSH2-203ENST00000394848 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
SSH2-203ENST00000394848 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
SSH2-203ENST00000394848 NLRP6P59044 892 aa16.53■□□□□ 0.24
SSH2-203ENST00000394848 SLFN5Q08AF3 891 aa16.53■□□□□ 0.24
SSH2-203ENST00000394848 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
SSH2-203ENST00000394848 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
SSH2-203ENST00000394848 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.24
SSH2-203ENST00000394848 WWC1Q8IX03 1113 aa16.52■□□□□ 0.24
SSH2-203ENST00000394848 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
SSH2-203ENST00000394848 HSPA1LP34931 641 aa16.51■□□□□ 0.23
SSH2-203ENST00000394848 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
SSH2-203ENST00000394848 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
SSH2-203ENST00000394848 RRP7AQ9Y3A4 280 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms