RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 NRKQ7Z2Y5 1582 aa22.74■■□□□ 1.23
SLC6A4-202ENST00000394821 NGDNQ8NEJ9 315 aaKnown RBP22.73■■□□□ 1.23
SLC6A4-202ENST00000394821 ZNF335Q9H4Z2 1342 aaPredicted RBP22.73■■□□□ 1.23
SLC6A4-202ENST00000394821 ANKARQ7Z5J8 1434 aa22.73■■□□□ 1.23
SLC6A4-202ENST00000394821 USP6P35125 1406 aa22.73■■□□□ 1.23
SLC6A4-202ENST00000394821 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
SLC6A4-202ENST00000394821 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
SLC6A4-202ENST00000394821 TTC21BQ7Z4L5 1316 aa22.72■■□□□ 1.23
SLC6A4-202ENST00000394821 POLR3AO14802 1390 aaPredicted RBP22.71■■□□□ 1.23
SLC6A4-202ENST00000394821 ORAI2Q96SN7 254 aa22.7■■□□□ 1.22
SLC6A4-202ENST00000394821 IRX6P78412 446 aaPredicted RBP22.69■■□□□ 1.22
SLC6A4-202ENST00000394821 ESCO1Q5FWF5 840 aa22.69■■□□□ 1.22
SLC6A4-202ENST00000394821 SSH2Q76I76 1423 aa22.69■■□□□ 1.22
SLC6A4-202ENST00000394821 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
SLC6A4-202ENST00000394821 PHF8Q9UPP1 1060 aa22.68■■□□□ 1.22
SLC6A4-202ENST00000394821 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
SLC6A4-202ENST00000394821 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
SLC6A4-202ENST00000394821 BLMP54132 1417 aaPredicted RBP22.66■■□□□ 1.22
SLC6A4-202ENST00000394821 INSRP06213 1382 aa22.66■■□□□ 1.22
SLC6A4-202ENST00000394821 SHPRHQ149N8 1683 aa22.65■■□□□ 1.22
SLC6A4-202ENST00000394821 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
SLC6A4-202ENST00000394821 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
SLC6A4-202ENST00000394821 MAP2P11137 1827 aaKnown RBP22.64■■□□□ 1.21
SLC6A4-202ENST00000394821 COG3Q96JB2 828 aa22.63■■□□□ 1.21
SLC6A4-202ENST00000394821 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
SLC6A4-202ENST00000394821 XPCQ01831 940 aaPredicted RBP22.62■■□□□ 1.21
SLC6A4-202ENST00000394821 POLKQ9UBT6 870 aa22.62■■□□□ 1.21
SLC6A4-202ENST00000394821 PPM1GO15355 546 aaPredicted RBP22.62■■□□□ 1.21
SLC6A4-202ENST00000394821 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
SLC6A4-202ENST00000394821 EMILIN1Q9Y6C2 1016 aa22.62■■□□□ 1.21
SLC6A4-202ENST00000394821 LRRC7Q96NW7 1537 aa22.61■■□□□ 1.21
SLC6A4-202ENST00000394821 RRS1Q15050 365 aaKnown RBP22.61■■□□□ 1.21
SLC6A4-202ENST00000394821 C1orf167Q5SNV9 1468 aa22.61■■□□□ 1.21
SLC6A4-202ENST00000394821 PIK3C2AO00443 1686 aa22.61■■□□□ 1.21
SLC6A4-202ENST00000394821 SOX12O15370 315 aa22.6■■□□□ 1.21
SLC6A4-202ENST00000394821 FOXO3O43524 673 aa22.6■■□□□ 1.21
SLC6A4-202ENST00000394821 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
SLC6A4-202ENST00000394821 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
SLC6A4-202ENST00000394821 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
SLC6A4-202ENST00000394821 ATF3P18847 181 aa22.59■■□□□ 1.21
SLC6A4-202ENST00000394821 MST1RQ04912 1400 aa22.59■■□□□ 1.21
SLC6A4-202ENST00000394821 DDX17Q92841 729 aaKnown RBP22.58■■□□□ 1.21
SLC6A4-202ENST00000394821 COL3A1P02461 1466 aaPredicted RBP22.58■■□□□ 1.21
SLC6A4-202ENST00000394821 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
SLC6A4-202ENST00000394821 PSME1Q06323 249 aa22.56■■□□□ 1.2
SLC6A4-202ENST00000394821 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
SLC6A4-202ENST00000394821 NCOA3Q9Y6Q9 1424 aa22.55■■□□□ 1.2
SLC6A4-202ENST00000394821 MARF1Q9Y4F3 1742 aaKnown RBP22.55■■□□□ 1.2
SLC6A4-202ENST00000394821 RNF123Q5XPI4 1314 aa22.55■■□□□ 1.2
SLC6A4-202ENST00000394821 MSH6P52701 1360 aa22.54■■□□□ 1.2
SLC6A4-202ENST00000394821 NLRP6P59044 892 aa22.54■■□□□ 1.2
SLC6A4-202ENST00000394821 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
SLC6A4-202ENST00000394821 ERICH6BQ5W0A0 696 aa22.53■■□□□ 1.2
SLC6A4-202ENST00000394821 PELP1Q8IZL8 1130 aaKnown RBP22.53■■□□□ 1.2
SLC6A4-202ENST00000394821 PNPLA6Q8IY17 1366 aa22.53■■□□□ 1.2
SLC6A4-202ENST00000394821 AATKQ6ZMQ8 1374 aa22.52■■□□□ 1.2
SLC6A4-202ENST00000394821 DCCP43146 1447 aa22.52■■□□□ 1.2
SLC6A4-202ENST00000394821 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
SLC6A4-202ENST00000394821 CADPS2Q86UW7 1296 aa22.52■■□□□ 1.2
SLC6A4-202ENST00000394821 PDE3BQ13370 1112 aa22.51■■□□□ 1.19
SLC6A4-202ENST00000394821 CDCA7LQ96GN5 454 aa22.51■■□□□ 1.19
SLC6A4-202ENST00000394821 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
SLC6A4-202ENST00000394821 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
SLC6A4-202ENST00000394821 U2SURPO15042 1029 aaKnown RBP22.5■■□□□ 1.19
SLC6A4-202ENST00000394821 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
SLC6A4-202ENST00000394821 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
SLC6A4-202ENST00000394821 PEAK1Q9H792 1746 aa22.49■■□□□ 1.19
SLC6A4-202ENST00000394821 APAF1O14727 1248 aa22.49■■□□□ 1.19
SLC6A4-202ENST00000394821 DIAPH1O60610 1272 aaKnown RBP22.48■■□□□ 1.19
SLC6A4-202ENST00000394821 KRT28Q7Z3Y7 464 aa22.48■■□□□ 1.19
SLC6A4-202ENST00000394821 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
SLC6A4-202ENST00000394821 TRPM3Q9HCF6 1732 aaPredicted RBP22.46■■□□□ 1.19
SLC6A4-202ENST00000394821 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
SLC6A4-202ENST00000394821 LMOD2Q6P5Q4 547 aa22.45■■□□□ 1.18
SLC6A4-202ENST00000394821 PPP4R2Q9NY27 417 aa22.45■■□□□ 1.18
SLC6A4-202ENST00000394821 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
SLC6A4-202ENST00000394821 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.18
SLC6A4-202ENST00000394821 IL13P35225 146 aa22.44■■□□□ 1.18
SLC6A4-202ENST00000394821 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
SLC6A4-202ENST00000394821 BRINP3Q76B58 766 aa22.43■■□□□ 1.18
SLC6A4-202ENST00000394821 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
SLC6A4-202ENST00000394821 USP54Q70EL1 1684 aa22.43■■□□□ 1.18
SLC6A4-202ENST00000394821 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
SLC6A4-202ENST00000394821 ZNF521Q96K83 1311 aa22.41■■□□□ 1.18
SLC6A4-202ENST00000394821 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
SLC6A4-202ENST00000394821 HMOX1P09601 288 aa22.4■■□□□ 1.18
SLC6A4-202ENST00000394821 RUNDC1Q96C34 613 aa22.4■■□□□ 1.18
SLC6A4-202ENST00000394821 PLEKHF1Q96S99 279 aa22.4■■□□□ 1.18
SLC6A4-202ENST00000394821 EIF4A2Q14240 407 aaKnown RBP22.39■■□□□ 1.18
SLC6A4-202ENST00000394821 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.18
SLC6A4-202ENST00000394821 RCAN3Q9UKA8 241 aa22.39■■□□□ 1.18
SLC6A4-202ENST00000394821 LTBP4Q8N2S1 1624 aa22.38■■□□□ 1.17
SLC6A4-202ENST00000394821 IQSEC2Q5JU85 1478 aa22.37■■□□□ 1.17
SLC6A4-202ENST00000394821 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
SLC6A4-202ENST00000394821 NFAT5O94916 1531 aa22.36■■□□□ 1.17
SLC6A4-202ENST00000394821 AMPHP49418 695 aa22.36■■□□□ 1.17
SLC6A4-202ENST00000394821 PXDNQ92626 1479 aa22.36■■□□□ 1.17
SLC6A4-202ENST00000394821 LTN1O94822 1766 aa22.36■■□□□ 1.17
SLC6A4-202ENST00000394821 ZBTB7CA1YPR0 619 aa22.35■■□□□ 1.17
SLC6A4-202ENST00000394821 B4GALNT3Q6L9W6 998 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms