RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 STK26Q9P289 416 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 QRICH2Q9H0J4 1663 aa7.42□□□□□ -1.22
MATR3-230ENST00000394800 VGFO15240 615 aaPredicted RBP7.41□□□□□ -1.22
MATR3-230ENST00000394800 RPGRIP1LQ68CZ1 1315 aa7.41□□□□□ -1.22
MATR3-230ENST00000394800 ZBTB22O15209 634 aa7.41□□□□□ -1.22
MATR3-230ENST00000394800 ZC3H13Q5T200 1668 aaKnown RBP7.41□□□□□ -1.22
MATR3-230ENST00000394800 ARHGEF28Q8N1W1 1705 aaKnown RBP7.41□□□□□ -1.22
MATR3-230ENST00000394800 TNNT3P45378 269 aaPredicted RBP7.4□□□□□ -1.22
MATR3-230ENST00000394800 IL27Q8NEV9 243 aa7.4□□□□□ -1.22
MATR3-230ENST00000394800 GORABQ5T7V8 394 aa7.4□□□□□ -1.23
MATR3-230ENST00000394800 BLMP54132 1417 aaPredicted RBP7.4□□□□□ -1.23
MATR3-230ENST00000394800 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.23
MATR3-230ENST00000394800 PLEKHH1Q9ULM0 1364 aa7.4□□□□□ -1.23
MATR3-230ENST00000394800 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
MATR3-230ENST00000394800 CLTCQ00610 1675 aaKnown RBP7.39□□□□□ -1.23
MATR3-230ENST00000394800 CABP2Q9NPB3 220 aa7.39□□□□□ -1.23
MATR3-230ENST00000394800 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
MATR3-230ENST00000394800 NPC1L1Q9UHC9 1359 aa7.39□□□□□ -1.23
MATR3-230ENST00000394800 TULP4Q9NRJ4 1543 aa7.39□□□□□ -1.23
MATR3-230ENST00000394800 AAMPQ13685 434 aa7.39□□□□□ -1.23
MATR3-230ENST00000394800 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
MATR3-230ENST00000394800 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
MATR3-230ENST00000394800 FAM177A1Q8N128 213 aaPredicted RBP7.39□□□□□ -1.23
MATR3-230ENST00000394800 CCDC146Q8IYE0 955 aa7.38□□□□□ -1.23
MATR3-230ENST00000394800 NSD3Q9BZ95 1437 aa7.38□□□□□ -1.23
MATR3-230ENST00000394800 NEFHP12036 1026 aa7.38□□□□□ -1.23
MATR3-230ENST00000394800 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
MATR3-230ENST00000394800 SETQ01105 290 aaPredicted RBP7.38□□□□□ -1.23
MATR3-230ENST00000394800 CCDC97Q96F63 343 aaPredicted RBP7.38□□□□□ -1.23
MATR3-230ENST00000394800 CIZ1Q9ULV3 898 aaPredicted RBP7.38□□□□□ -1.23
MATR3-230ENST00000394800 SPINK5Q9NQ38 1064 aaPredicted RBP7.37□□□□□ -1.23
MATR3-230ENST00000394800 AGLP35573 1532 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 ZFYVE9O95405 1425 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 MINK1Q8N4C8 1332 aaPredicted RBP7.37□□□□□ -1.23
MATR3-230ENST00000394800 CLGNO14967 610 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 PLIN1O60240 522 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 PAF1Q8N7H5 531 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 PRAM1Q96QH2 718 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 DMRT2Q9Y5R5 561 aa7.37□□□□□ -1.23
MATR3-230ENST00000394800 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
MATR3-230ENST00000394800 FTSJ3Q8IY81 847 aaKnown RBP7.37□□□□□ -1.23
MATR3-230ENST00000394800 PTPRMP28827 1452 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 ANP32AP39687 249 aaKnown RBP7.36□□□□□ -1.23
MATR3-230ENST00000394800 PPP4R3CPQ6ZMV5 832 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 REREQ9P2R6 1566 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 PLCD3Q8N3E9 789 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
MATR3-230ENST00000394800 ZNF521Q96K83 1311 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 APAF1O14727 1248 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 A2ML1A8K2U0 1454 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 IRX3P78415 501 aaPredicted RBP7.36□□□□□ -1.23
MATR3-230ENST00000394800 WDR43Q15061 677 aaKnown RBP eCLIP7.36□□□□□ -1.237e-6■■□□□ 14
MATR3-230ENST00000394800 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 STAG3Q9UJ98 1225 aa7.36□□□□□ -1.23
MATR3-230ENST00000394800 YTHDC2Q9H6S0 1430 aaKnown RBP7.35□□□□□ -1.23
MATR3-230ENST00000394800 ALKQ9UM73 1620 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 EVC2Q86UK5 1308 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 RRP1P56182 461 aaKnown RBP7.35□□□□□ -1.23
MATR3-230ENST00000394800 CCDC27Q2M243 656 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 PDE3BQ13370 1112 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 EXOC6Q8TAG9 804 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 ARHGEF40Q8TER5 1519 aa7.35□□□□□ -1.23
MATR3-230ENST00000394800 ZMYM3Q14202 1370 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 SPATA31D1Q6ZQQ2 1576 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
MATR3-230ENST00000394800 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 INSRP06213 1382 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 MTHFSP49914 203 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 SRPK2P78362 688 aaKnown RBP7.34□□□□□ -1.23
MATR3-230ENST00000394800 MFAP1P55081 439 aaKnown RBP7.34□□□□□ -1.23
MATR3-230ENST00000394800 A0A1W2PP64 1363 aa7.34□□□□□ -1.23
MATR3-230ENST00000394800 MORC1Q86VD1 984 aa7.34□□□□□ -1.24
MATR3-230ENST00000394800 C20orf194Q5TEA3 1177 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 CEBPAP49715 358 aaPredicted RBP7.33□□□□□ -1.24
MATR3-230ENST00000394800 CREBRFQ8IUR6 639 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 ZBTB47Q9UFB7 747 aaPredicted RBP7.33□□□□□ -1.24
MATR3-230ENST00000394800 FBLN1P23142 703 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 ANKRD36BQ8N2N9 1353 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 CD163L1Q9NR16 1453 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 SHPRHQ149N8 1683 aa7.33□□□□□ -1.24
MATR3-230ENST00000394800 SETD1AO15047 1707 aaKnown RBP7.33□□□□□ -1.24
MATR3-230ENST00000394800 POGKQ9P215 609 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 METP08581 1390 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 PIAS4Q8N2W9 510 aaPredicted RBP7.32□□□□□ -1.24
MATR3-230ENST00000394800 RIMS2Q9UQ26 1411 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 PPP6R1Q9UPN7 881 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 NCKAP5LQ9HCH0 1330 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
MATR3-230ENST00000394800 TCERG1O14776 1098 aaKnown RBP7.32□□□□□ -1.24
MATR3-230ENST00000394800 IPO4Q8TEX9 1081 aaKnown RBP7.32□□□□□ -1.24
MATR3-230ENST00000394800 NRXN3Q9Y4C0 1643 aa7.32□□□□□ -1.24
MATR3-230ENST00000394800 RRP7AQ9Y3A4 280 aaKnown RBP7.31□□□□□ -1.24
MATR3-230ENST00000394800 CGNL1Q0VF96 1302 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 FYB1O15117 783 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 MCCP23508 829 aa7.31□□□□□ -1.24
MATR3-230ENST00000394800 SSR1P43307 286 aaKnown RBP7.31□□□□□ -1.24
MATR3-230ENST00000394800 CDK19Q9BWU1 502 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms