RNA–Protein interactions for RNA: ENST00000394711.1

CLCA1-202, Transcript of chloride channel accessory 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA1, Length 3,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1-202ENST00000394711 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
CLCA1-202ENST00000394711 XRN1Q8IZH2 1706 aaKnown RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 MST1RQ04912 1400 aa7.43□□□□□ -1.22
CLCA1-202ENST00000394711 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 MKRN3Q13064 507 aaKnown RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 GZF1Q9H116 711 aaPredicted RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
CLCA1-202ENST00000394711 SPHKAPQ2M3C7 1700 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 ZNF526Q8TF50 670 aaPredicted RBP7.42□□□□□ -1.22
CLCA1-202ENST00000394711 RBM33Q96EV2 1170 aaKnown RBP7.42□□□□□ -1.22
CLCA1-202ENST00000394711 NPHP3Q7Z494 1330 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 IL27Q8NEV9 243 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 BCCIPQ9P287 314 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLCA1-202ENST00000394711 LRP6O75581 1613 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 KIF1BO60333 1816 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 PNPLA6Q8IY17 1366 aa7.42□□□□□ -1.22
CLCA1-202ENST00000394711 GTPBP6O43824 516 aaPredicted RBP7.41□□□□□ -1.22
CLCA1-202ENST00000394711 ZRANB1Q9UGI0 708 aa7.41□□□□□ -1.22
CLCA1-202ENST00000394711 LAMC1P11047 1609 aa7.41□□□□□ -1.22
CLCA1-202ENST00000394711 NUTM2DQ5VT03 806 aaPredicted RBP7.41□□□□□ -1.22
CLCA1-202ENST00000394711 SOS2Q07890 1332 aaPredicted RBP7.41□□□□□ -1.22
CLCA1-202ENST00000394711 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.41□□□□□ -1.22
CLCA1-202ENST00000394711 C8orf37Q96NL8 207 aa7.4□□□□□ -1.22
CLCA1-202ENST00000394711 PTPRUQ92729 1446 aa7.4□□□□□ -1.22
CLCA1-202ENST00000394711 FNBP4Q8N3X1 1017 aaPredicted RBP7.4□□□□□ -1.23
CLCA1-202ENST00000394711 SIRT1Q96EB6 747 aa7.4□□□□□ -1.23
CLCA1-202ENST00000394711 USP21Q9UK80 565 aa7.4□□□□□ -1.23
CLCA1-202ENST00000394711 C1orf167Q5SNV9 1468 aa7.4□□□□□ -1.23
CLCA1-202ENST00000394711 PSME1Q06323 249 aa7.39□□□□□ -1.23
CLCA1-202ENST00000394711 SF3B2Q13435 895 aaKnown RBP7.38□□□□□ -1.23
CLCA1-202ENST00000394711 ANKRD30BQ9BXX2 1392 aa7.38□□□□□ -1.23
CLCA1-202ENST00000394711 ABCB7O75027 752 aa7.38□□□□□ -1.23
CLCA1-202ENST00000394711 ZC3H15Q8WU90 426 aaKnown RBP7.38□□□□□ -1.23
CLCA1-202ENST00000394711 NEXMIFQ5QGS0 1516 aa7.37□□□□□ -1.23
CLCA1-202ENST00000394711 METP08581 1390 aa7.37□□□□□ -1.23
CLCA1-202ENST00000394711 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
CLCA1-202ENST00000394711 NRXN3Q9Y4C0 1643 aa7.37□□□□□ -1.23
CLCA1-202ENST00000394711 E9PSI1 815 aa7.37□□□□□ -1.23
CLCA1-202ENST00000394711 STAC3Q96MF2 364 aa7.36□□□□□ -1.23
CLCA1-202ENST00000394711 ATRNO75882 1429 aa7.36□□□□□ -1.23
CLCA1-202ENST00000394711 EIF3AQ14152 1382 aaKnown RBP7.36□□□□□ -1.23
CLCA1-202ENST00000394711 TICAM2Q86XR7 235 aa7.36□□□□□ -1.23
CLCA1-202ENST00000394711 RGS12O14924 1447 aa7.36□□□□□ -1.23
CLCA1-202ENST00000394711 CDC42BPGQ6DT37 1551 aa7.36□□□□□ -1.23
CLCA1-202ENST00000394711 CCDC144AA2RUR9 1427 aa7.35□□□□□ -1.23
CLCA1-202ENST00000394711 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
CLCA1-202ENST00000394711 KDM4AO75164 1064 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 ITGAEP38570 1179 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 ABCC11Q96J66 1382 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 KIF1AQ12756 1690 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 RRBP1Q9P2E9 1410 aaKnown RBP7.34□□□□□ -1.23
CLCA1-202ENST00000394711 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
CLCA1-202ENST00000394711 CAPN15O75808 1086 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 ZEB1P37275 1124 aaPredicted RBP7.34□□□□□ -1.23
CLCA1-202ENST00000394711 ESCO1Q5FWF5 840 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 GJD4Q96KN9 370 aaPredicted RBP7.34□□□□□ -1.23
CLCA1-202ENST00000394711 PSMD1Q99460 953 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 TECPR2O15040 1411 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 CLTCL1P53675 1640 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 NALCNQ8IZF0 1738 aa7.34□□□□□ -1.23
CLCA1-202ENST00000394711 STK25O00506 426 aa7.34□□□□□ -1.24
CLCA1-202ENST00000394711 UNC5CLQ8IV45 518 aa7.33□□□□□ -1.24
CLCA1-202ENST00000394711 PRDM16Q9HAZ2 1276 aa7.33□□□□□ -1.24
CLCA1-202ENST00000394711 ARHGEF10O15013 1369 aa7.33□□□□□ -1.24
CLCA1-202ENST00000394711 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.33□□□□□ -1.24
CLCA1-202ENST00000394711 KCNV2Q8TDN2 545 aa7.33□□□□□ -1.24
CLCA1-202ENST00000394711 BLMP54132 1417 aaPredicted RBP7.33□□□□□ -1.24
CLCA1-202ENST00000394711 MYOM2P54296 1465 aa7.33□□□□□ -1.24
CLCA1-202ENST00000394711 DHX57Q6P158 1386 aaKnown RBP7.32□□□□□ -1.24
CLCA1-202ENST00000394711 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
CLCA1-202ENST00000394711 PRDM10Q9NQV6 1147 aa7.32□□□□□ -1.24
CLCA1-202ENST00000394711 NAIPQ13075 1403 aa7.32□□□□□ -1.24
CLCA1-202ENST00000394711 SBNO1A3KN83 1393 aa7.32□□□□□ -1.24
CLCA1-202ENST00000394711 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
CLCA1-202ENST00000394711 ROBO2Q9HCK4 1378 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 MARF1Q9Y4F3 1742 aaKnown RBP7.31□□□□□ -1.24
CLCA1-202ENST00000394711 KNDC1Q76NI1 1749 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 BAG6P46379 1132 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 CLUAP1Q96AJ1 413 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 SPATA31A3Q5VYP0 1347 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 PPLO60437 1756 aa7.31□□□□□ -1.24
CLCA1-202ENST00000394711 VPS72Q15906 364 aa7.3□□□□□ -1.24
CLCA1-202ENST00000394711 KRT28Q7Z3Y7 464 aa7.3□□□□□ -1.24
CLCA1-202ENST00000394711 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
CLCA1-202ENST00000394711 IRF5Q13568 498 aa7.3□□□□□ -1.24
CLCA1-202ENST00000394711 TRAIPQ9BWF2 469 aa7.3□□□□□ -1.24
CLCA1-202ENST00000394711 ANKARQ7Z5J8 1434 aa7.29□□□□□ -1.24
CLCA1-202ENST00000394711 PXDNQ92626 1479 aa7.29□□□□□ -1.24
CLCA1-202ENST00000394711 PHF8Q9UPP1 1060 aa7.29□□□□□ -1.24
CLCA1-202ENST00000394711 FOXO3O43524 673 aa7.29□□□□□ -1.24
CLCA1-202ENST00000394711 ONECUT3O60422 494 aaPredicted RBP7.29□□□□□ -1.24
CLCA1-202ENST00000394711 SLIT2O94813 1529 aa7.28□□□□□ -1.24
CLCA1-202ENST00000394711 GPRASP1Q5JY77 1395 aa7.28□□□□□ -1.24
CLCA1-202ENST00000394711 NWD2Q9ULI1 1742 aa7.28□□□□□ -1.24
CLCA1-202ENST00000394711 BCL9LQ86UU0 1499 aa7.28□□□□□ -1.24
CLCA1-202ENST00000394711 TNS3Q68CZ2 1445 aa7.28□□□□□ -1.24
CLCA1-202ENST00000394711 RETREG2Q8NC44 543 aa7.27□□□□□ -1.24
CLCA1-202ENST00000394711 NAP1L5Q96NT1 182 aaPredicted RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms