RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
APLF-202ENST00000394342 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
APLF-202ENST00000394342 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
APLF-202ENST00000394342 SRPK2P78362 688 aaKnown RBP12.13□□□□□ -0.47
APLF-202ENST00000394342 ILDR2Q71H61 639 aa12.13□□□□□ -0.47
APLF-202ENST00000394342 NGDNQ8NEJ9 315 aaKnown RBP12.13□□□□□ -0.47
APLF-202ENST00000394342 POLR3AO14802 1390 aaPredicted RBP12.13□□□□□ -0.47
APLF-202ENST00000394342 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
APLF-202ENST00000394342 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
APLF-202ENST00000394342 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
APLF-202ENST00000394342 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
APLF-202ENST00000394342 ACEP12821 1306 aa12.1□□□□□ -0.47
APLF-202ENST00000394342 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
APLF-202ENST00000394342 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
APLF-202ENST00000394342 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
APLF-202ENST00000394342 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
APLF-202ENST00000394342 COL14A1Q05707 1796 aaKnown RBP12.09□□□□□ -0.47
APLF-202ENST00000394342 AFF2P51816 1311 aa12.09□□□□□ -0.47
APLF-202ENST00000394342 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
APLF-202ENST00000394342 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
APLF-202ENST00000394342 POTEAQ6S8J7 498 aa12.08□□□□□ -0.48
APLF-202ENST00000394342 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
APLF-202ENST00000394342 NRAPQ86VF7 1730 aa12.08□□□□□ -0.48
APLF-202ENST00000394342 USP47Q96K76 1375 aa12.07□□□□□ -0.48
APLF-202ENST00000394342 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
APLF-202ENST00000394342 LMOD2Q6P5Q4 547 aa12.07□□□□□ -0.48
APLF-202ENST00000394342 USP6P35125 1406 aa12.06□□□□□ -0.48
APLF-202ENST00000394342 ST20-MTHFSA0A0A6YYL1 179 aa12.06□□□□□ -0.48
APLF-202ENST00000394342 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
APLF-202ENST00000394342 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
APLF-202ENST00000394342 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
APLF-202ENST00000394342 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
APLF-202ENST00000394342 FNBP4Q8N3X1 1017 aaPredicted RBP12.05□□□□□ -0.48
APLF-202ENST00000394342 PUS7Q96PZ0 661 aaKnown RBP12.05□□□□□ -0.48
APLF-202ENST00000394342 TESK2Q96S53 571 aa12.05□□□□□ -0.48
APLF-202ENST00000394342 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
APLF-202ENST00000394342 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
APLF-202ENST00000394342 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
APLF-202ENST00000394342 SLIT2O94813 1529 aa12.04□□□□□ -0.48
APLF-202ENST00000394342 MYOM1P52179 1685 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
APLF-202ENST00000394342 SSH2Q76I76 1423 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 EP400Q96L91 3159 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 BRWD3Q6RI45 1802 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 SOCS7O14512 581 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
APLF-202ENST00000394342 USP21Q9UK80 565 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 ATRNO75882 1429 aa12.03□□□□□ -0.48
APLF-202ENST00000394342 LTN1O94822 1766 aa12.02□□□□□ -0.48
APLF-202ENST00000394342 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.48
APLF-202ENST00000394342 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.48
APLF-202ENST00000394342 NINLQ9Y2I6 1382 aa12.02□□□□□ -0.49
APLF-202ENST00000394342 CD163L1Q9NR16 1453 aa12.02□□□□□ -0.49
APLF-202ENST00000394342 RXRBP28702 533 aa12.01□□□□□ -0.49
APLF-202ENST00000394342 ABTB2Q8N961 1025 aa12.01□□□□□ -0.49
APLF-202ENST00000394342 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
APLF-202ENST00000394342 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
APLF-202ENST00000394342 SLIT3O75094 1523 aa12.01□□□□□ -0.49
APLF-202ENST00000394342 LMO7Q8WWI1 1683 aa12□□□□□ -0.49
APLF-202ENST00000394342 PLEKHG5O94827 1062 aa12□□□□□ -0.49
APLF-202ENST00000394342 RBM6P78332 1123 aaKnown RBP12□□□□□ -0.49
APLF-202ENST00000394342 TMF1P82094 1093 aa12□□□□□ -0.49
APLF-202ENST00000394342 USP19O94966 1318 aa12□□□□□ -0.49
APLF-202ENST00000394342 KTN1Q86UP2 1357 aaKnown RBP12□□□□□ -0.49
APLF-202ENST00000394342 GLI3P10071 1580 aa12□□□□□ -0.49
APLF-202ENST00000394342 COL18A1P39060 1754 aa12□□□□□ -0.49
APLF-202ENST00000394342 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
APLF-202ENST00000394342 UNC5CLQ8IV45 518 aa11.99□□□□□ -0.49
APLF-202ENST00000394342 TTC21AQ8NDW8 1320 aa11.99□□□□□ -0.49
APLF-202ENST00000394342 EDC4Q6P2E9 1401 aaKnown RBP11.98□□□□□ -0.49
APLF-202ENST00000394342 TTC21BQ7Z4L5 1316 aa11.98□□□□□ -0.49
APLF-202ENST00000394342 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
APLF-202ENST00000394342 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
APLF-202ENST00000394342 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
APLF-202ENST00000394342 TMC1Q8TDI8 760 aa11.98□□□□□ -0.49
APLF-202ENST00000394342 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
APLF-202ENST00000394342 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
APLF-202ENST00000394342 TERF2IPQ9NYB0 399 aa11.97□□□□□ -0.49
APLF-202ENST00000394342 WNK3Q9BYP7 1800 aa11.97□□□□□ -0.49
APLF-202ENST00000394342 RGS12O14924 1447 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 CPDO75976 1380 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 KIAA0232Q92628 1395 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 NLRP6P59044 892 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 PRDM11Q9NQV5 511 aa11.96□□□□□ -0.49
APLF-202ENST00000394342 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
APLF-202ENST00000394342 VPS72Q15906 364 aa11.95□□□□□ -0.5
APLF-202ENST00000394342 NFAT5O94916 1531 aa11.95□□□□□ -0.5
APLF-202ENST00000394342 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 USP31Q70CQ4 1352 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 GCP02774 474 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 GJD4Q96KN9 370 aaPredicted RBP11.94□□□□□ -0.5
APLF-202ENST00000394342 BTG4Q9NY30 223 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
APLF-202ENST00000394342 ABCC6O95255 1503 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
APLF-202ENST00000394342 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
APLF-202ENST00000394342 THSD7AQ9UPZ6 1657 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms