RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
TGFA-202ENST00000394241 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
TGFA-202ENST00000394241 LMOD2Q6P5Q4 547 aa22.98■■□□□ 1.27
TGFA-202ENST00000394241 PHF8Q9UPP1 1060 aa22.98■■□□□ 1.27
TGFA-202ENST00000394241 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
TGFA-202ENST00000394241 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
TGFA-202ENST00000394241 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
TGFA-202ENST00000394241 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
TGFA-202ENST00000394241 DISP2A7MBM2 1401 aa22.96■■□□□ 1.27
TGFA-202ENST00000394241 SIRT1Q96EB6 747 aa22.95■■□□□ 1.26
TGFA-202ENST00000394241 TNS1Q9HBL0 1735 aaKnown RBP22.95■■□□□ 1.26
TGFA-202ENST00000394241 FAM182BQ5T319 152 aa22.93■■□□□ 1.26
TGFA-202ENST00000394241 YY1P25490 414 aa22.92■■□□□ 1.26
TGFA-202ENST00000394241 PRAM1Q96QH2 718 aa22.92■■□□□ 1.26
TGFA-202ENST00000394241 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
TGFA-202ENST00000394241 POGKQ9P215 609 aa22.91■■□□□ 1.26
TGFA-202ENST00000394241 COL14A1Q05707 1796 aaKnown RBP22.91■■□□□ 1.26
TGFA-202ENST00000394241 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
TGFA-202ENST00000394241 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
TGFA-202ENST00000394241 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
TGFA-202ENST00000394241 THSD7AQ9UPZ6 1657 aa22.89■■□□□ 1.25
TGFA-202ENST00000394241 ADGRB2O60241 1585 aa22.89■■□□□ 1.25
TGFA-202ENST00000394241 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
TGFA-202ENST00000394241 QRICH2Q9H0J4 1663 aa22.87■■□□□ 1.25
TGFA-202ENST00000394241 SPATA31A5Q5VU36 1347 aa22.86■■□□□ 1.25
TGFA-202ENST00000394241 SPATA31A7Q8IWB4 1347 aa22.86■■□□□ 1.25
TGFA-202ENST00000394241 CAMKK2Q96RR4 588 aa22.85■■□□□ 1.25
TGFA-202ENST00000394241 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
TGFA-202ENST00000394241 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
TGFA-202ENST00000394241 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
TGFA-202ENST00000394241 ALS2Q96Q42 1657 aa22.83■■□□□ 1.24
TGFA-202ENST00000394241 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
TGFA-202ENST00000394241 TRIM37O94972 964 aa22.81■■□□□ 1.24
TGFA-202ENST00000394241 ANKARQ7Z5J8 1434 aa22.81■■□□□ 1.24
TGFA-202ENST00000394241 MINK1Q8N4C8 1332 aaPredicted RBP22.81■■□□□ 1.24
TGFA-202ENST00000394241 RREB1Q92766 1687 aa22.8■■□□□ 1.24
TGFA-202ENST00000394241 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
TGFA-202ENST00000394241 APBA3O96018 575 aa22.78■■□□□ 1.24
TGFA-202ENST00000394241 CRYBG1Q9Y4K1 1723 aa22.78■■□□□ 1.24
TGFA-202ENST00000394241 USP47Q96K76 1375 aa22.77■■□□□ 1.24
TGFA-202ENST00000394241 NUP188Q5SRE5 1749 aa22.77■■□□□ 1.24
TGFA-202ENST00000394241 HIRIP3Q9BW71 556 aaPredicted RBP22.77■■□□□ 1.24
TGFA-202ENST00000394241 PRDM11Q9NQV5 511 aa22.75■■□□□ 1.23
TGFA-202ENST00000394241 SPATA31A1Q5TZJ5 1347 aa22.75■■□□□ 1.23
TGFA-202ENST00000394241 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
TGFA-202ENST00000394241 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
TGFA-202ENST00000394241 DCAF8L1A6NGE4 600 aa22.73■■□□□ 1.23
TGFA-202ENST00000394241 NBPF14Q5TI25 921 aa22.73■■□□□ 1.23
TGFA-202ENST00000394241 WASLO00401 505 aaPredicted RBP22.72■■□□□ 1.23
TGFA-202ENST00000394241 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
TGFA-202ENST00000394241 SPON1Q9HCB6 807 aa22.7■■□□□ 1.22
TGFA-202ENST00000394241 NINLQ9Y2I6 1382 aa22.7■■□□□ 1.22
TGFA-202ENST00000394241 ITSN1Q15811 1721 aa22.69■■□□□ 1.22
TGFA-202ENST00000394241 ATP7BP35670 1465 aa22.68■■□□□ 1.22
TGFA-202ENST00000394241 ST20-MTHFSA0A0A6YYL1 179 aa22.68■■□□□ 1.22
TGFA-202ENST00000394241 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
TGFA-202ENST00000394241 KIAA0232Q92628 1395 aa22.67■■□□□ 1.22
TGFA-202ENST00000394241 EVC2Q86UK5 1308 aa22.67■■□□□ 1.22
TGFA-202ENST00000394241 KCNQ2O43526 872 aa22.67■■□□□ 1.22
TGFA-202ENST00000394241 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
TGFA-202ENST00000394241 PRR36Q9H6K5 1346 aa22.66■■□□□ 1.22
TGFA-202ENST00000394241 TOPAZ1Q8N9V7 1692 aa22.66■■□□□ 1.22
TGFA-202ENST00000394241 PDE3BQ13370 1112 aa22.66■■□□□ 1.22
TGFA-202ENST00000394241 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
TGFA-202ENST00000394241 CHRNA2Q15822 529 aa22.65■■□□□ 1.22
TGFA-202ENST00000394241 USP35Q9P2H5 1018 aa22.65■■□□□ 1.22
TGFA-202ENST00000394241 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.22
TGFA-202ENST00000394241 EIF4G2P78344 907 aaKnown RBP eCLIP22.64■■□□□ 1.21
TGFA-202ENST00000394241 SRPK2P78362 688 aaKnown RBP22.64■■□□□ 1.21
TGFA-202ENST00000394241 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
TGFA-202ENST00000394241 CAMTA1Q9Y6Y1 1673 aa22.64■■□□□ 1.21
TGFA-202ENST00000394241 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
TGFA-202ENST00000394241 BARGINQ6ZT62 677 aa22.63■■□□□ 1.21
TGFA-202ENST00000394241 TESK2Q96S53 571 aa22.63■■□□□ 1.21
TGFA-202ENST00000394241 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
TGFA-202ENST00000394241 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
TGFA-202ENST00000394241 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
TGFA-202ENST00000394241 CABP2Q9NPB3 220 aa22.6■■□□□ 1.21
TGFA-202ENST00000394241 HSPA5P11021 654 aaKnown RBP22.59■■□□□ 1.21
TGFA-202ENST00000394241 EVA1CP58658 441 aa22.59■■□□□ 1.21
TGFA-202ENST00000394241 ZC3H6P61129 1189 aaKnown RBP22.59■■□□□ 1.21
TGFA-202ENST00000394241 TMF1P82094 1093 aa22.57■■□□□ 1.2
TGFA-202ENST00000394241 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
TGFA-202ENST00000394241 CCDC61Q9Y6R9 512 aa22.56■■□□□ 1.2
TGFA-202ENST00000394241 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
TGFA-202ENST00000394241 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
TGFA-202ENST00000394241 RGPD3A6NKT7 1758 aaPredicted RBP22.55■■□□□ 1.2
TGFA-202ENST00000394241 RGPD4Q7Z3J3 1758 aa22.55■■□□□ 1.2
TGFA-202ENST00000394241 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
TGFA-202ENST00000394241 NRKQ7Z2Y5 1582 aa22.54■■□□□ 1.2
TGFA-202ENST00000394241 PARP4Q9UKK3 1724 aaKnown RBP22.54■■□□□ 1.2
TGFA-202ENST00000394241 CASZ1Q86V15 1759 aa22.53■■□□□ 1.2
TGFA-202ENST00000394241 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
TGFA-202ENST00000394241 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
TGFA-202ENST00000394241 PUS7Q96PZ0 661 aaKnown RBP22.52■■□□□ 1.2
TGFA-202ENST00000394241 CDCA8Q53HL2 280 aa22.51■■□□□ 1.19
TGFA-202ENST00000394241 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
TGFA-202ENST00000394241 LMO7Q8WWI1 1683 aa22.51■■□□□ 1.19
TGFA-202ENST00000394241 SBF2Q86WG5 1849 aa22.5■■□□□ 1.19
TGFA-202ENST00000394241 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms